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NIPSNAP3A

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:38.8TPM
GTEx:9.7RPKM
FANTOM5:23.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
 

Antibody staining

Antibody HPA042491

  

Endothelial cells

 Medium  

Glandular cells

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

38.8
overview Male, age 54 Sample 1
TPM: 37
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 34.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 38.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 44.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 17.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 31.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 49.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 40
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 44.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 56.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 39.8
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 45
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 25.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.7

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 6.8
Samples: 149

Max RPKM: 14.1
Min RPKM: 2.9
Std RPKM: 1.7
Median RPKM: 6.7
GTEX-13U4I-2626-SM-5SI9C 40-49 years, female 14.1
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 11.6
GTEX-11DXZ-1626-SM-5GIDI 50-59 years, male 11.0
GTEX-14C39-1626-SM-5S2P4 40-49 years, male 10.9
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 10.7
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 9.6
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 9.6
GTEX-11ONC-1926-SM-5GU75 60-69 years, male 9.6
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 9.6
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 9.6
Show all
Colon - Transverse
RPKM: 11.8
Samples: 196

Max RPKM: 26.4
Min RPKM: 1.3
Std RPKM: 4.6
Median RPKM: 12.3
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 26.4
GTEX-11P82-1026-SM-5BC5J 20-29 years, male 25.2
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 24.0
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 22.0
GTEX-12BJ1-2126-SM-5BC5O 60-69 years, male 21.9
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 21.6
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 21.6
GTEX-133LE-1526-SM-5IFEN 20-29 years, female 20.5
GTEX-W5WG-2426-SM-4LMI6 50-59 years, female 19.9
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 19.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

23.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 23.0
FF:10014-101C5 62,83,84 years, mixed 23.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.