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CDK9

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:16.7TPM
GTEx:28.8RPKM
FANTOM5:29.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA006738

  

Antibody CAB004216

  

Endothelial cells

 High   Medium  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 High   High  
   
   

COLON - HPA RNA-seq

Average TPM

16.7
overview Male, age 54 Sample 1
TPM: 21.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 14.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 27.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 11
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 15.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 11.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 14.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 17
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 14
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 16.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 20.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 20.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

28.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 34.2
Samples: 149

Max RPKM: 59.5
Min RPKM: 17.7
Std RPKM: 8.8
Median RPKM: 32.5
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 59.5
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 55.4
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 55.4
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 55.2
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 53.3
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 51.8
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 51.7
GTEX-YECK-2826-SM-5IFHF 60-69 years, male 50.0
GTEX-145LS-2926-SM-5O99G 60-69 years, female 49.5
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 49.3
Show all
Colon - Transverse
RPKM: 24.7
Samples: 196

Max RPKM: 54.4
Min RPKM: 11.4
Std RPKM: 7.3
Median RPKM: 23.2
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 54.4
GTEX-11TUW-2026-SM-5EQL8 60-69 years, male 48.4
GTEX-145MO-2426-SM-5NQ9W 60-69 years, male 46.8
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 44.1
GTEX-S341-1426-SM-4AD6U 40-49 years, female 43.9
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 42.4
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 41.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 40.1
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 40.0
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 39.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

29.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 29.4
FF:10014-101C5 62,83,84 years, mixed 29.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.