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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:110.9TPM
GTEx:69.5RPKM
FANTOM5:125.3Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Chondrocytes:Medium
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA047478

  

Antibody HPA055752

  

Antibody CAB008678

  

Adipocytes

 Not detected   Not detected   Not detected  

Chondrocytes

 Medium   Medium  

Fibroblasts

 Low   Low   Not detected  

Peripheral nerve

 Not detected  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
 
 

Antibody staining

Antibody HPA047478

  

Antibody HPA055752

  

Antibody CAB008678

  

Adipocytes

 Not detected   Not detected   Not detected  

Fibroblasts

 Not detected   Not detected   Not detected  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

110.9
N/A Female, age 80 Sample 1
TPM: 92.1
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 80.9
N/A Female, age 57 Sample 3
TPM: 73.9
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 166.3
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 141.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

69.5

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 67.6
Samples: 350

Max RPKM: 339.4
Min RPKM: 35.6
Std RPKM: 21.9
Median RPKM: 64.6
GTEX-ZYVF-0226-SM-5GIEG 50-59 years, female 339.4
GTEX-13G51-2626-SM-5LZYW 60-69 years, male 166.4
GTEX-X4XY-0326-SM-46MVZ 60-69 years, male 149.2
GTEX-13O61-2426-SM-5J1NV 60-69 years, male 141.2
GTEX-Y5V6-2526-SM-5IFJV 60-69 years, male 123.5
GTEX-ZDTT-2626-SM-5S2OP 60-69 years, male 111.0
GTEX-Y3IK-2526-SM-4WWDM 50-59 years, female 108.2
GTEX-Q2AH-1726-SM-3NB2B 40-49 years, male 107.3
GTEX-12ZZX-0226-SM-5DUXU 40-49 years, female 105.4
GTEX-11H98-0226-SM-5NQ89 50-59 years, male 103.1
Show all
Adipose - Visceral (Omentum)
RPKM: 72.3
Samples: 227

Max RPKM: 322.9
Min RPKM: 28.3
Std RPKM: 33.5
Median RPKM: 61.6
GTEX-13X6H-1726-SM-5Q5EH 50-59 years, female 322.9
GTEX-ZYVF-1026-SM-5E44V 50-59 years, female 252.6
GTEX-ZLV1-0926-SM-5S2MR 60-69 years, female 184.7
GTEX-132QS-0826-SM-5K7WV 60-69 years, male 163.8
GTEX-13O61-1926-SM-5KM1R 60-69 years, male 161.3
GTEX-ZV7C-0826-SM-59HK8 50-59 years, male 158.9
GTEX-Y5LM-0826-SM-4VDSW 40-49 years, female 150.4
GTEX-1399S-1426-SM-5PNYQ 30-39 years, female 149.5
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 143.7
GTEX-13RTK-0726-SM-5Q5EN 20-29 years, male 138.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

125.3

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 125.3
FF:10010-101C1 65,65,76 years, mixed 125.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.