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TOR1B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:20.5TPM
GTEx:10.2RPKM
FANTOM5:28.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Low
 

Antibody staining

Antibody HPA013403

  

Antibody HPA013697

  

Antibody CAB022709

  

Endothelial cells

 Medium   Not detected   Medium  

Glandular cells

 High   Medium   High  

Peripheral nerve/ganglion

 Not detected   Not detected   Medium  
     
     
     

COLON - HPA RNA-seq

Average TPM

20.5
overview Male, age 54 Sample 1
TPM: 37
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 12.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 16.6
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 20.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 13.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 15.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 26.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 19.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 19.6
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 22.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 25.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 22.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 15
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 7.6
Samples: 149

Max RPKM: 13.3
Min RPKM: 3.9
Std RPKM: 1.6
Median RPKM: 7.4
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 13.3
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 11.4
GTEX-ZZ64-0826-SM-5E449 20-29 years, male 11.4
GTEX-XBED-1726-SM-47JYO 60-69 years, male 11.0
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 10.9
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 10.5
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 10.5
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 10.4
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 10.3
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 10.2
Show all
Colon - Transverse
RPKM: 12.2
Samples: 196

Max RPKM: 20.9
Min RPKM: 5.3
Std RPKM: 3.7
Median RPKM: 12.3
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 20.9
GTEX-WHWD-1226-SM-4OOS1 50-59 years, male 20.4
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 19.3
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 18.9
GTEX-S7SF-1926-SM-4AT5B 20-29 years, female 18.8
GTEX-139YR-2126-SM-5KM11 50-59 years, male 18.7
GTEX-Q734-1126-SM-48TZY 40-49 years, female 18.4
GTEX-S4Q7-0826-SM-4AD5E 20-29 years, male 18.4
GTEX-ZPU1-1926-SM-57WDT 40-49 years, male 18.2
GTEX-P4QT-1426-SM-3NMCX 50-59 years, female 18.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

28.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 28.3
FF:10014-101C5 62,83,84 years, mixed 28.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.