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YIPF3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:61.1TPM
GTEx:34.8RPKM
FANTOM5:101.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA014859

  

Antibody HPA063699

  

Endothelial cells

 Not detected   Low  

Glandular cells

 Medium   High  

Peripheral nerve/ganglion

 Low   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

61.1
overview Male, age 54 Sample 1
TPM: 85.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 62.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 44.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 53.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 40.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 55.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 57.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 58.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 61.9
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 70.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 84.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 62.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 57.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

34.8

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 30.8
Samples: 149

Max RPKM: 40.4
Min RPKM: 22.4
Std RPKM: 4.1
Median RPKM: 30.9
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 40.4
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 40.3
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 39.9
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 39.7
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 39.1
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 39.0
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 37.8
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 37.7
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 37.5
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 37.5
Show all
Colon - Transverse
RPKM: 37.8
Samples: 196

Max RPKM: 60.5
Min RPKM: 14.7
Std RPKM: 7.6
Median RPKM: 37.8
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 60.5
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 55.7
GTEX-Q734-1126-SM-48TZY 40-49 years, female 54.8
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 54.4
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 53.9
GTEX-QLQW-0426-SM-447A7 30-39 years, male 53.2
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 52.8
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 51.8
GTEX-WFON-1426-SM-4LVMT 40-49 years, male 51.8
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 51.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

101.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 101.4
FF:10014-101C5 62,83,84 years, mixed 101.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.