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Term
Gene name

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Chromosome

External id

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Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

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Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

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Category

Score

Score

Score

Antibodies

Column

 
 
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PATHOLOGY ATLAS MELANOMA

GENE/PROTEIN

Antibody validation

Dictionary

Melanoma

MELANOMA - Survival analysis

Best separation

Median separation

Expression cutoff

40.7 FPKM 22.9 FPKM

3-year survival high

0% 21%

3-year survival low

42% 36%

Log-rank P value

1.89e-2 5.48e-1

Interactive survival scatter plot (individual patient data)




Stage:



TCGA RNA samples

Average FPKM

27.0

Number of samples

102

Samples

Sample

Description

FPKM

TCGA-EB-A82C-01A 70 years, female, asian, stage:iic 93.2
TCGA-EB-A24D-01A 72 years, male, white, stage:iiib 84.6
TCGA-EB-A41A-01A 90 years, male, white, stage:iic 78.7
TCGA-EB-A431-01A 34 years, male, white, stage:iic 64.4
TCGA-EB-A5FP-01A 65 years, female, white, stage:iv 62.8
TCGA-EB-A85J-01A 66 years, female, white, stage:iib 62.1
TCGA-EB-A3XF-01A 57 years, male, white, stage:iic 61.5
TCGA-EB-A6R0-01A 58 years, female, white, stage:iic 60.1
TCGA-EB-A51B-01A 53 years, male, white, stage:iic 58.3
TCGA-GF-A2C7-01A 48 years, male, white, stage:iic 54.4
TCGA-EB-A44P-01A 58 years, female, white, stage:iic 53.2
TCGA-FS-A1ZN-01A 43 years, male, white, stage:iiia 48.5
TCGA-FR-A2OS-01A 49 years, female, white, stage:iic 48.1
TCGA-EB-A57M-01A 56 years, male, asian, stage:iiib 47.6
TCGA-EB-A5SE-01A 73 years, male, white, stage:iib 46.5
TCGA-EB-A3XB-01A 63 years, male, white, stage:ii 45.9
TCGA-FR-A726-01A 90 years, male, white, stage:iic 45.4
TCGA-BF-AAP4-01A 61 years, male, white, stage:iic 45.3
TCGA-ER-A19T-01A 51 years, male, white, stage:iv 43.8
TCGA-EB-A4P0-01A 82 years, male, white, stage:iic 41.9
TCGA-BF-AAP6-01A 55 years, male, white, stage:iii 40.8
TCGA-EB-A24C-01A 56 years, male, white 40.7
TCGA-D3-A5GT-01A 43 years, male, white, stage:iiic 40.2
TCGA-BF-AAP1-01A 86 years, male, white, stage:iic 39.8
TCGA-BF-A5ES-01A 76 years, female, white, stage:iic 39.0
TCGA-EB-A82B-01A 58 years, female, asian, stage:iii 38.7
TCGA-WE-A8K4-01A 85 years, male, white, stage:iib 38.4
TCGA-ER-A42H-01A 77 years, male, white 36.1
TCGA-EB-A97M-01A 66 years, male, white, stage:iic 35.7
TCGA-EB-A5UM-01A 48 years, female, white, stage:iic 35.1
TCGA-BF-A1PZ-01A 71 years, female, white, stage:iib 34.7
TCGA-ER-A2NF-01A 53 years, male, white, stage:iiib 33.2
TCGA-EB-A6QZ-01A 76 years, female, white, stage:iia 33.1
TCGA-EB-A3Y7-01A 86 years, female, white, stage:iiib 32.9
TCGA-BF-AAP2-01A 62 years, male, white, stage:iib 32.6
TCGA-EB-A4IS-01A 77 years, male, white, stage:iib 32.0
TCGA-ER-A19K-01A 79 years, female, white, stage:iic 30.0
TCGA-BF-A1PV-01A 74 years, female, white, stage:iic 29.8
TCGA-YG-AA3N-01A 67 years, male, stage:iic 29.0
TCGA-EB-A4XL-01A 56 years, female, white, stage:iic 27.1
TCGA-FR-A3R1-01A 69 years, male, white, stage:iic 25.9
TCGA-BF-AAOX-01A 83 years, male, white, stage:iic 25.5
TCGA-BF-A9VF-01A 77 years, male, white, stage:iic 25.5
TCGA-EB-A3Y6-01A 56 years, female, white, stage:iic 25.3
TCGA-EB-A4IQ-01A 42 years, female, asian, stage:iiib 25.2
TCGA-EB-A6QY-01A 71 years, male, white, stage:iic 25.0
TCGA-BF-A1PU-01A 46 years, female, white, stage:iic 24.3
TCGA-IH-A3EA-01A 61 years, male, white, stage:iic 24.2
TCGA-BF-A5ER-01A 63 years, male, white, stage:iic 23.5
TCGA-ER-A196-01A 64 years, female, white, stage:iic 23.3
TCGA-ER-A194-01A 77 years, male, white 23.1
TCGA-BF-A3DL-01A 84 years, female, white, stage:iiib 22.6
TCGA-EB-A3XC-01A 74 years, male, white, stage:iic 22.0
TCGA-D9-A3Z4-01A 54 years, male, white, stage:iiic 20.5
TCGA-BF-A5EQ-01A 63 years, male, white, stage:iic 20.4
TCGA-GN-A4U5-01A 61 years, female, white, stage:ib 20.4
TCGA-BF-A3DJ-01A 36 years, female, white, stage:iiib 19.9
TCGA-EB-A551-01A 78 years, female, white, stage:iiic 19.1
TCGA-BF-A5EP-01A 75 years, female, white, stage:iiic 18.8
TCGA-BF-AAOU-01A 73 years, female, white, stage:iic 18.8
TCGA-GN-A8LN-01A 68 years, male, white, stage:iic 18.1
TCGA-BF-A3DM-01A 63 years, male, white, stage:iia 18.0
TCGA-EB-A1NK-01A 48 years, male, white, stage:iic 16.8
TCGA-HR-A5NC-01A 90 years, female 16.8
TCGA-D9-A4Z2-01A 50 years, male, white, stage:iiic 16.7
TCGA-EB-A41B-01A 76 years, female, white, stage:iic 16.2
TCGA-EB-A3XE-01A 77 years, female, white, stage:iia 16.0
TCGA-FR-A728-01A 54 years, female, white, stage:iiib 16.0
TCGA-BF-AAP8-01A 58 years, male, white, stage:iic 15.7
TCGA-EB-A42Z-01A 49 years, male, asian, stage:iiic 15.7
TCGA-EB-A44O-01A 69 years, male, white, stage:iib 15.3
TCGA-BF-A5EO-01A 65 years, male, white, stage:iic 15.3
TCGA-EB-A44N-01A 59 years, male, white, stage:iic 15.3
TCGA-EB-A3XD-01A 53 years, female, white, stage:iic 15.0
TCGA-BF-A3DN-01A 81 years, female, white, stage:iiic 14.9
TCGA-EB-A85I-01A 66 years, male, white, stage:iic 14.4
TCGA-BF-A1PX-01A 56 years, male, white, stage:iiib 14.2
TCGA-EB-A5VU-01A 56 years, male, asian, stage:iiib 14.1
TCGA-D9-A4Z5-01A 68 years, male, white, stage:iib 14.1
TCGA-XV-AAZW-01A 62 years, female, white, stage:ii 14.0
TCGA-BF-AAP7-01A 76 years, female, white, stage:iic 12.6
TCGA-EB-A4OY-01A 65 years, female, white, stage:iiib 11.9
TCGA-EB-A299-01A 63 years, male, white, stage:iia 11.7
TCGA-EB-A3HV-01A 37 years, male, white, stage:iic 11.7
TCGA-EB-A550-01A 75 years, female, white, stage:iic 11.5
TCGA-XV-A9W2-01A 81 years, male, white, stage:i 9.6
TCGA-XV-AAZY-01A 76 years, female, white, stage:iiic 9.6
TCGA-GF-A769-01A 39 years, male, white, stage:iic 9.5
TCGA-GN-A263-01A 24 years, male, white, stage:iv 8.7
TCGA-EB-A42Y-01A 73 years, female, asian, stage:iic 7.7
TCGA-ER-A2NB-01A 57 years, male, white, stage:iiib 6.2
TCGA-D9-A4Z3-01A 73 years, female, white, stage:iiic 6.1
TCGA-FW-A5DX-01A 71 years, male, white, stage:iiic 5.9
TCGA-XV-A9W5-01A 51 years, male, white, stage:i/ii nos 5.0
TCGA-DA-A960-01A 73 years, male, white, stage:iib 5.0
TCGA-EB-A553-01A 62 years, male, white, stage:iic 4.5
TCGA-EB-A4OZ-01A 42 years, female, white, stage:iiic 4.5
TCGA-EB-A5SF-01A 78 years, female, white, stage:iic 2.4
TCGA-BF-A1Q0-01A 80 years, male, white, stage:iic 2.0
TCGA-XV-AAZV-01A 56 years, female, white, stage:ii 1.7
TCGA-GN-A26C-01A 77 years, male, white, stage:iiic 1.1
TCGA-XV-A9VZ-01A 90 years, female, white, stage:ii 1.0
Show all

MELANOMA - Protein expression

 

Antibody HPA002038

Antibody HPA002698

Antibody CAB013508

 Antibody staining
  High
  Medium
  Low
  Not detected
    
 Intensity
  Strong
  Moderate
  Weak
  Negative
    
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
    
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
    

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