Tissue expression of HMGA1 - Staining in lung

LUNG - Expression summary

Protein expression

RNA expression

HPA:	26.0	TPM
GTEx:	28.3	RPKM
FANTOM5:	73.5	Tags Per Million

LUNG - Annotated protein expression

Annotated protein
expression

Macrophages:	Medium
Pneumocytes:	Not detected

Antibody staining	Antibody CAB032200
Macrophages	Medium
Pneumocytes	Not detected

LUNG - HPA RNA-seq

Average TPM	26.0

Female, age 71

Sample 1
TPM: 33.1

Cell types%

Pneumocytes: 40
Bronchial epithelium: 5
Endothelial cells: 25
Macrophages: 10
Other cell types: 20

Male, age 57

Sample 2
TPM: 27.5

Cell types%

Pneumocytes: 35
Bronchial epithelium: 5
Endothelial cells: 30
Macrophages: 10
Other cell types: 20

Female, age 71

Sample 3
TPM: 29.1

Cell types%

Pneumocytes: 35
Bronchial epithelium: 10
Endothelial cells: 25
Macrophages: 10
Other cell types: 20

Female, age 74

Sample 4
TPM: 24

Cell types%

Pneumocytes: 40
Bronchial epithelium: 0
Endothelial cells: 30
Macrophages: 15
Other cell types: 15

Female, age 73

Sample 5
TPM: 30.6

Cell types%

Pneumocytes: 30
Bronchial epithelium: 5
Endothelial cells: 30
Macrophages: 10
Other cell types: 25

Male, age 74

Sample 6
TPM: 16.5

Cell types%

Pneumocytes: 25
Bronchial epithelium: 0
Endothelial cells: 35
Macrophages: 5
Other cell types: 35

Female, age 70

Sample 7
TPM: 19.8

Cell types%

Pneumocytes: 35
Bronchial epithelium: 5
Endothelial cells: 35
Macrophages: 5
Other cell types: 20

Female, age 75

Sample 8
TPM: 19.1

Cell types%

Pneumocytes: 20
Bronchial epithelium: 10
Endothelial cells: 20
Macrophages: 10
Other cell types: 40

Male, age 63

Sample 9
TPM: 34.2

Cell types%

Pneumocytes: 25
Bronchial epithelium: 5
Endothelial cells: 25
Macrophages: 15
Other cell types: 30

LUNG - GTEx RNA-seq

Average RPKM	28.3

GTEx sample id

Sample description

RPKM

Lung
RPKM: 28.3

Samples: 320

Max RPKM: 120.3
Min RPKM: 7.6
Std RPKM: 16.9
Median RPKM: 23.4

GTEX-11WQK-1226-SM-5GU5Z

50-59 years, male

120.3

GTEX-11OF3-1126-SM-5986C

60-69 years, male

108.9

GTEX-11NV4-1126-SM-5HL6J

60-69 years, male

106.8

GTEX-ZYY3-0926-SM-5E454

60-69 years, female

100.6

GTEX-11UD2-0726-SM-5EQ69

50-59 years, male

94.8

GTEX-OHPM-0526-SM-2YUMJ

50-59 years, male

85.3

GTEX-12584-1426-SM-5EGJ9

40-49 years, male

83.5

GTEX-13OW6-0826-SM-5L3GA

50-59 years, male

82.3

GTEX-111CU-0326-SM-5GZXO

50-59 years, male

78.3

GTEX-S7SF-0426-SM-3K2B7

20-29 years, female

76.7

Show all

LUNG - FANTOM5 CAGE

Average Tags Per Million	73.5

FANTOM5 sample id

Sample description

Tags Per Million

Lung
Tags Per Million: 110.9

FF:10019-101D1

46,65,94 years, mixed

110.9

Lung - right lower lobe
Tags Per Million: 36.1

FF:10075-102A3

29 years, male

36.1