We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
IDH1
  • premium

    TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:267.5TPM
GTEx:65.4RPKM
FANTOM5:193.8Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Not detected
Hepatocytes:Medium
 

Antibody staining

Antibody HPA035248

 

Antibody HPA057936

 

Antibody CAB033218

 

Antibody CAB062556

 

Bile duct cells

Not detected   Not detected   Not detected   Not detected  

Hepatocytes

Medium   Low   Medium   Not detected  
       
       
       

LIVER - HPA RNA-seq

Average TPM

267.5

N/A Female, age 60 Sample 1
TPM: 227
overview Male, age 54 Sample 2
TPM: 226.5
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74 Sample 3
TPM: 258.2
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62 Sample 4
TPM: 386
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78 Sample 5
TPM: 229.6
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53 Sample 6
TPM: 227.8
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77 Sample 7
TPM: 269.2
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72 Sample 8
TPM: 200.6
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70 Sample 9
TPM: 264.9
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23 Sample 10
TPM: 385.4
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

65.4

GTEx sample id

Sample description

RPKM

Liver
RPKM: 65.4
Samples: 119

Max RPKM: 173.0
Min RPKM: 13.2
Std RPKM: 27.2
Median RPKM: 61.8
GTEX-R53T-0326-SM-48FEC 50-59 years, female 173.0
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 159.1
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 132.8
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 117.0
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 109.7
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 108.7
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 107.5
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 105.0
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 102.4
GTEX-P78B-1326-SM-3P611 40-49 years, female 101.3
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 99.2
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 95.0
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 94.7
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 94.2
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 93.7
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 92.9
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 92.8
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 92.6
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 91.6
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 89.9
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 89.6
GTEX-QV44-0326-SM-4R1KD 50-59 years, male 89.6
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 87.9
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 87.7
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 87.7
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 86.2
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 85.4
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 84.7
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 84.2
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 83.5
GTEX-13112-1426-SM-5EGH8 50-59 years, male 82.9
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 81.6
GTEX-RN64-1826-SM-48FDV 50-59 years, male 80.6
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 80.5
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 80.4
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 79.7
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 79.0
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 78.8
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 76.7
GTEX-UPIC-0926-SM-4IHLV 20-29 years, female 76.2
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 76.1
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 75.7
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 75.6
GTEX-QESD-2026-SM-447BI 20-29 years, male 74.8
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 74.2
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 72.0
GTEX-1399T-0826-SM-5IFES 60-69 years, male 72.0
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 71.0
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 70.3
GTEX-YECK-1926-SM-4W21H 60-69 years, male 70.1
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 65.3
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 64.2
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 63.9
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 63.4
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 63.1
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 62.9
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 62.9
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 62.4
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 62.2
GTEX-Q734-0326-SM-48U15 40-49 years, female 61.8
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 60.5
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 59.9
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 59.8
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 59.6
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 58.8
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 58.7
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 58.6
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 58.4
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 57.9
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 57.5
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 57.1
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 56.0
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 55.9
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 54.9
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 54.6
GTEX-ZF29-2026-SM-4WWB7 60-69 years, female 54.5
GTEX-11GSP-0626-SM-5986T 60-69 years, female 53.7
GTEX-13113-1326-SM-5GCOI 60-69 years, female 53.6
GTEX-S33H-1626-SM-4AD68 30-39 years, male 52.8
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 52.1
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 51.3
GTEX-QEL4-1226-SM-447A4 50-59 years, male 50.7
GTEX-RU72-1426-SM-46MUF 50-59 years, female 50.7
GTEX-QEG4-1826-SM-4R1JN 30-39 years, male 50.4
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 50.0
GTEX-11ZUS-2526-SM-59872 30-39 years, male 49.8
GTEX-S32W-1926-SM-4AD63 50-59 years, female 46.8
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 46.4
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 46.2
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 44.7
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 44.1
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 43.2
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 42.9
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 42.6
GTEX-X261-1726-SM-4PQYT 50-59 years, male 42.4
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 41.9
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 41.4
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 40.1
GTEX-REY6-1226-SM-48FDR 60-69 years, male 39.2
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 38.9
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 38.7
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 38.4
GTEX-XOTO-0826-SM-4B65O 50-59 years, male 36.3
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 36.0
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 35.4
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 35.0
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 33.0
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 32.2
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 32.0
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 31.8
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 29.1
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 27.7
GTEX-12696-0826-SM-5EGGE 60-69 years, male 27.3
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 26.8
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 22.8
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 22.7
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 21.0
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 20.2
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 13.2
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

193.8

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 193.8
FF:10018-101C9 64,69,70 years, mixed 193.8

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.