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HADH

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:97.9TPM
GTEx:36.5RPKM
FANTOM5:119.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
 

Antibody staining

Antibody HPA039588

  

Endothelial cells

 High  

Glandular cells

 High  
 
 
 

COLON - HPA RNA-seq

Average TPM

97.9
overview Male, age 54 Sample 1
TPM: 82.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 67.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 92.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 100.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 34.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 128.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 164.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 92.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 91.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 146.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 104.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 111.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 55.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

36.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 23.3
Samples: 149

Max RPKM: 58.8
Min RPKM: 10.3
Std RPKM: 7.4
Median RPKM: 21.3
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 58.8
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 51.8
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 40.7
GTEX-ZQG8-2426-SM-57WEE 60-69 years, female 40.3
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 40.2
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 39.0
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 38.1
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 37.6
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 36.4
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 35.8
Show all
Colon - Transverse
RPKM: 46.5
Samples: 196

Max RPKM: 115.5
Min RPKM: 8.0
Std RPKM: 22.5
Median RPKM: 44.8
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 115.5
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 105.9
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 102.1
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 100.7
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 98.1
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 97.8
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 89.8
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 88.0
GTEX-PLZ5-1126-SM-3P613 50-59 years, male 87.3
GTEX-11EM3-1526-SM-5A5KN 20-29 years, female 86.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

119.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 119.1
FF:10014-101C5 62,83,84 years, mixed 119.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.