We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
PIANP
  • TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA HIPPOCAMPUS

GENE/PROTEIN

Antibody validation


Dictionary

Hippocampus

HIPPOCAMPUS - Expression summary

Protein expression

h
m
l
n

RNA expression

GTEx:33.1RPKM
FANTOM5:96.1Tags Per Million

HIPPOCAMPUS - Annotated protein expression

Annotated protein
expression

Glial cells:Not detected
Neuronal cells:Low
 

Antibody staining

Antibody HPA010631

 

Glial cells

Not detected  

Neuronal cells

Low  
 
 
 

HIPPOCAMPUS - HPA RNA-seq

Pending HPA RNA-seq analysis


HIPPOCAMPUS - GTEx RNA-seq

Average RPKM

33.1

GTEx sample id

Sample description

RPKM

Brain - Hippocampus
RPKM: 33.1
Samples: 94

Max RPKM: 75.9
Min RPKM: 3.2
Std RPKM: 18.2
Median RPKM: 34.2
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 75.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 72.5
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 70.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 69.3
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 66.9
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 66.0
GTEX-X585-0011-R1B-SM-46MVE 50-59 years, male 64.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 58.5
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 55.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 54.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 53.5
GTEX-XOTO-0011-R1B-SM-4B65C 50-59 years, male 53.1
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 52.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 51.4
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 50.5
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 50.0
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 49.6
GTEX-RNOR-0011-R1A-SM-5SI8F 50-59 years, female 49.6
GTEX-T5JC-0011-R1A-SM-32PM6 20-29 years, male 49.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 48.4
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 48.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 47.7
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 47.4
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 47.1
GTEX-S7SE-0011-R1A-SM-2XCDE 50-59 years, male 46.7
GTEX-N7MT-0011-R1a-SM-5SI7S 60-69 years, female 46.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 44.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 44.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 44.1
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 43.0
GTEX-ZAB4-0011-R1a-SM-4RGNO 40-49 years, male 42.8
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 42.3
GTEX-13OW6-0011-R1a-SM-5L3HQ 50-59 years, male 42.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 41.3
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 39.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 39.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 39.1
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 38.7
GTEX-13G51-0011-R1a-SM-5LZYR 60-69 years, male 38.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 38.0
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 38.0
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 37.4
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 36.3
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 36.1
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 35.3
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 34.8
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 34.4
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 34.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 33.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 32.3
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 31.9
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 29.8
GTEX-13SLW-0011-R1a-SM-5S2W7 70-79 years, male 29.8
GTEX-13N2G-0011-R1b-SM-5MR3G 60-69 years, male 29.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 29.3
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 27.5
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 26.6
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 26.0
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 25.9
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 25.0
GTEX-145LS-0011-R1b-SM-5PNUP 60-69 years, female 24.3
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 21.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 21.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 21.4
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 20.1
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 19.8
GTEX-ZUA1-0011-R1a-SM-4YCE2 40-49 years, male 19.5
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 19.3
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 16.6
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 16.4
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 16.4
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 16.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 15.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 14.0
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 13.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 13.2
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 13.2
GTEX-11GSO-0011-R1b-SM-57WD3 60-69 years, male 13.0
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 12.6
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 11.9
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 11.9
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 11.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 11.1
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 9.8
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 8.4
GTEX-12WSB-0011-R1b-SM-5P9EY 60-69 years, female 8.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 8.1
GTEX-1212Z-0011-R1b-SM-5BC72 60-69 years, male 7.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 7.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 6.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 6.1
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 4.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 4.9
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 3.2
Show all

HIPPOCAMPUS - FANTOM5 CAGE

Average Tags Per Million

96.1

FANTOM5 sample id

Sample description

Tags Per Million

Hippocampus
Tags Per Million: 118.8
FF:10153-102I9 76 years, female 142.0
FF:10169-103B7 60 years, female 95.5

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.