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AK7

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.3TPM
GTEx:0.4RPKM
FANTOM5:3.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
 

Antibody staining

Antibody HPA003543

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  
 

COLON - HPA RNA-seq

Average TPM

2.3
overview Male, age 54 Sample 1
TPM: 3.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 2.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 1.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 2.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 3.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 2.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 2.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 3.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.2
Samples: 149

Max RPKM: 0.7
Min RPKM: 0.0
Std RPKM: 0.1
Median RPKM: 0.2
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 0.7
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 0.5
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 0.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 0.4
GTEX-12WSG-2426-SM-5EQLZ 50-59 years, female 0.4
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 0.4
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 0.4
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 0.4
GTEX-14BMU-1326-SM-5RQIH 20-29 years, female 0.4
GTEX-WHWD-1526-SM-4OORV 50-59 years, male 0.4
Show all
Colon - Transverse
RPKM: 0.6
Samples: 196

Max RPKM: 2.0
Min RPKM: 0.0
Std RPKM: 0.4
Median RPKM: 0.5
GTEX-144GN-1126-SM-5LU33 50-59 years, male 2.0
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 1.9
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 1.8
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 1.7
GTEX-145MN-1726-SM-5SIA6 30-39 years, male 1.5
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 1.5
GTEX-QCQG-1626-SM-48U26 50-59 years, female 1.5
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 1.4
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 1.4
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 1.3
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

3.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 3.9
FF:10014-101C5 62,83,84 years, mixed 3.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.