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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:45.0TPM
GTEx:20.9RPKM
FANTOM5:180.8Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Fibroblasts:High
Peripheral nerve:High
Chondrocytes:Low
 

Antibody staining

Antibody HPA008312

  

Antibody CAB010194

  

Antibody CAB016304

  

Adipocytes

 Medium   Medium   High  

Fibroblasts

 Medium   Medium   High  

Peripheral nerve

 Low   Not detected   High  

Chondrocytes

 Medium   Low  
     
     
     

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:High
Fibroblasts:High
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA008312

  

Antibody CAB010194

  

Antibody CAB016304

  

Adipocytes

 Medium   Medium   High  

Fibroblasts

 Medium   Medium   High  

Peripheral nerve

 Not detected   Not detected   Low  
        
     
     
     

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

45.0
N/A Female, age 80 Sample 1
TPM: 84.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 37.8
N/A Female, age 57 Sample 3
TPM: 36.2
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 36.4
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 30.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

20.9

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 22.5
Samples: 350

Max RPKM: 45.3
Min RPKM: 10.2
Std RPKM: 6.0
Median RPKM: 21.6
GTEX-ZAJG-0226-SM-5HL81 50-59 years, female 45.3
GTEX-13NZ8-0926-SM-5MR3U 60-69 years, female 43.3
GTEX-12584-0226-SM-5EQL5 40-49 years, male 42.6
GTEX-ZYY3-0226-SM-5E45M 60-69 years, female 40.9
GTEX-XLM4-0226-SM-4AT4N 60-69 years, male 39.4
GTEX-13CF3-2326-SM-5IFGL 60-69 years, female 36.2
GTEX-13PDP-0226-SM-5K7W9 60-69 years, male 35.9
GTEX-145MO-0426-SM-5QGP6 60-69 years, male 35.9
GTEX-ZYFD-0226-SM-5NQ86 50-59 years, male 35.5
GTEX-ZV68-0226-SM-59HJF 50-59 years, female 35.1
Show all
Adipose - Visceral (Omentum)
RPKM: 18.4
Samples: 227

Max RPKM: 55.4
Min RPKM: 7.6
Std RPKM: 6.9
Median RPKM: 17.4
GTEX-11GS4-1026-SM-5N9DE 60-69 years, male 55.4
GTEX-12584-2126-SM-5FQUM 40-49 years, male 38.9
GTEX-13JUV-0626-SM-5J1MQ 40-49 years, female 35.6
GTEX-13NYS-0726-SM-5J1OR 60-69 years, male 34.8
GTEX-13OW8-0326-SM-5L3FB 60-69 years, male 34.4
GTEX-12WSA-1626-SM-5EGJV 60-69 years, male 34.0
GTEX-WL46-2026-SM-3LK7U 50-59 years, male 33.0
GTEX-ZXG5-1626-SM-59HJK 60-69 years, male 32.9
GTEX-13OVJ-0926-SM-5K7U1 50-59 years, female 32.4
GTEX-WK11-2426-SM-3NMAA 50-59 years, male 31.2
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

180.8

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 180.8
FF:10010-101C1 65,65,76 years, mixed 180.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.