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MFGE8

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:45.1TPM
GTEx:64.6RPKM
FANTOM5:62.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Low
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA002807

  

Antibody CAB002753

  

Endothelial cells

 Medium   Not detected  

Glandular cells

 Not detected   Low  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

45.1
overview Male, age 54 Sample 1
TPM: 37.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 29.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 17.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 78.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 46.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 66.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 31.3
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 36.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 62.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 27.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 47.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 58.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 44.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

64.6

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 64.4
Samples: 149

Max RPKM: 241.8
Min RPKM: 23.0
Std RPKM: 32.1
Median RPKM: 56.3
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 241.8
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 223.6
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 179.2
GTEX-13OVJ-1826-SM-5KM2D 50-59 years, female 165.8
GTEX-WI4N-2226-SM-4OOS9 40-49 years, female 126.7
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 124.9
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 122.9
GTEX-111CU-1226-SM-5EGIN 50-59 years, male 116.2
GTEX-11EQ9-1526-SM-5PNY7 30-39 years, male 115.0
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 111.5
Show all
Colon - Transverse
RPKM: 64.8
Samples: 196

Max RPKM: 381.8
Min RPKM: 16.3
Std RPKM: 46.9
Median RPKM: 52.2
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 381.8
GTEX-13OVG-1426-SM-5K7VP 60-69 years, male 362.1
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 303.8
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 210.0
GTEX-12WSJ-1526-SM-5GCNI 40-49 years, female 175.6
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 149.1
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 142.9
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 140.7
GTEX-ZYFG-1926-SM-5GID5 60-69 years, female 134.0
GTEX-11EQ9-1426-SM-5987G 30-39 years, male 132.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

62.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 62.3
FF:10014-101C5 62,83,84 years, mixed 62.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.