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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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SH3GL3
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    TISSUE

  • CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

SH3GL3

Gene description

SH3-domain GRB2-like 3

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

2
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HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Mixed
HPA (cell line):Cell line enhanced (HEK93, K-562, RH-30)
HPA (normal tissue):Group enriched (cerebral cortex, testis)

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Selective expression in brain and testis

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining consistent with RNA expression data.

Reliability score

Supported based on 1 antibody.
HPA039381
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PROGNOSTIC SUMMARY

Gene product is not prognostic.
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RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Mixed

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA039381

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Few gliomas showed weak cytoplasmic positivity. Other cancer tissues were negative.

GENE INFORMATION

Gene name

SH3GL3 (HGNC Symbol)

Synonyms

CNSA3, EEN-B2, HsT19371, SH3D2C, SH3P13

Description

SH3-domain GRB2-like 3 (HGNC Symbol)

Entrez gene summary

Chromosome

15

Cytoband

q25.2

Chromosome location (bp)

83447228 - 83618743

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000140600 (version 83.38)

Entrez gene

6457

UniProt

Q99963 (UniProt - Evidence at protein level)

neXtProt

NX_Q99963

Antibodypedia

SH3GL3 antibodies

PROTEIN BROWSER

SH3GL3-001
SH3GL3-002

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

SH3GL3-001
ENSP00000320092
ENST00000324537
Q99963 [Direct mapping]
Endophilin-A3
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0005769 [early endosome]
GO:0006897 [endocytosis]
GO:0007165 [signal transduction]
GO:0007417 [central nervous system development]
GO:0008289 [lipid binding]
GO:0031901 [early endosome membrane]
GO:0042802 [identical protein binding]
GO:0070062 [extracellular exosome]
Show all
355 aa
40.2 kDa
No 0
SH3GL3-002
ENSP00000391372
ENST00000427482
Q99963 [Direct mapping]
Endophilin-A3
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005737 [cytoplasm]
GO:0006897 [endocytosis]
GO:0007165 [signal transduction]
GO:0007417 [central nervous system development]
GO:0008289 [lipid binding]
GO:0031901 [early endosome membrane]
GO:0042802 [identical protein binding]
GO:0070062 [extracellular exosome]
Show all
347 aa
39.3 kDa
No 0

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