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NCOR1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:44.1TPM
GTEx:10.4RPKM
FANTOM5:75.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA050288

  

Antibody HPA051168

  

Antibody CAB072830

  

Endothelial cells

 Medium   Low   Not detected  

Glandular cells

 High   Medium   Medium  

Peripheral nerve/ganglion

 Low  
     
     
     

COLON - HPA RNA-seq

Average TPM

44.1
overview Male, age 54 Sample 1
TPM: 43.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 57.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 57.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 44.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 37
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 31.6
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 44.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 41.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 44
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 44.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 50.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 45.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 31.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

10.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.6
Samples: 149

Max RPKM: 13.2
Min RPKM: 6.4
Std RPKM: 1.3
Median RPKM: 9.6
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 13.2
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 12.8
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 12.7
GTEX-WYVS-1126-SM-4SOJX 40-49 years, female 12.4
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 12.3
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 12.1
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 12.0
GTEX-117YX-0526-SM-5EGJH 50-59 years, male 11.8
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 11.8
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 11.6
Show all
Colon - Transverse
RPKM: 11.0
Samples: 196

Max RPKM: 19.7
Min RPKM: 4.7
Std RPKM: 2.1
Median RPKM: 10.8
GTEX-ZYWO-1626-SM-5E44H 40-49 years, female 19.7
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 19.5
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 17.2
GTEX-139YR-2126-SM-5KM11 50-59 years, male 16.8
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 15.9
GTEX-WFG7-1526-SM-4LVMG 20-29 years, male 15.9
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 15.2
GTEX-ZV7C-1526-SM-5NQ72 50-59 years, male 14.8
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 14.7
GTEX-R55G-1226-SM-48FDC 40-49 years, female 14.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

75.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 75.0
FF:10014-101C5 62,83,84 years, mixed 75.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.