Fields »
ABOUT
HELP
BLOG
SGSM2

CEREBRAL CORTEX - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:78.2TPM
GTEx:59.3RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glial cells:Medium
Neuronal cells:High
Neuropil:Low
 

Antibody staining

Antibody HPA021641

  

Antibody HPA024553

  

Endothelial cells

 Medium   Not detected  

Glial cells

 Medium   Low  

Neuronal cells

 High   Medium  

Neuropil

 Low   Low  
   
   
   

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

78.2
N/A Male, age 5 Sample 1
TPM: 75
overview Female, age 40 Sample 2
TPM: 77.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 82.3
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

59.3

GTEx sample id

Sample description

RPKM
Brain - Cortex
RPKM: 65.7
Samples: 114

Max RPKM: 95.1
Min RPKM: 33.7
Std RPKM: 12.7
Median RPKM: 66.1
GTEX-11NV4-2126-SM-5N9DS 60-69 years, male 95.1
GTEX-Y111-2726-SM-4TT3N 50-59 years, male 94.2
GTEX-Z93S-2926-SM-57WB9 50-59 years, male 93.1
GTEX-WL46-2926-SM-3LK82 50-59 years, male 89.0
GTEX-13JUV-2926-SM-5LZX7 40-49 years, female 85.6
GTEX-T5JC-2426-SM-3NMDB 20-29 years, male 85.0
GTEX-YJ89-3026-SM-5IFJI 60-69 years, male 83.2
GTEX-13FLW-1426-SM-5K7YE 50-59 years, male 82.8
GTEX-13OW6-3026-SM-5J2MI 50-59 years, male 82.7
GTEX-11ZUS-2926-SM-5FQSL 30-39 years, male 82.0
Show all
Brain - Frontal Cortex (BA9)
RPKM: 52.5
Samples: 108

Max RPKM: 107.2
Min RPKM: 24.5
Std RPKM: 13.2
Median RPKM: 52.5
GTEX-Z93S-0011-R10a-SM-4RGNM 50-59 years, male 107.2
GTEX-131XH-0011-R10a-SM-5EGLJ 50-59 years, male 84.7
GTEX-13OW6-0011-R10a-SM-5L3HE 50-59 years, male 84.7
GTEX-YJ89-0011-R10a-SM-4SOK9 60-69 years, male 78.1
GTEX-13FLV-0011-R10b-SM-5LZZ2 50-59 years, male 71.1
GTEX-13JUV-0011-R10b-SM-5LZXR 40-49 years, female 71.0
GTEX-13FXS-0011-R10a-SM-5J2MA 50-59 years, male 70.2
GTEX-13OVL-0011-R10a-SM-5L3GS 50-59 years, male 69.7
GTEX-N7MS-0011-R10A-SM-2HMJK 60-69 years, male 68.2
GTEX-TSE9-0011-R10A-SM-3DB7O 60-69 years, female 68.0
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.