Fields »
ABOUT
HELP
BLOG
C18orf21

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:12.9TPM
GTEx:5.2RPKM
FANTOM5:23.3Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Low
 

Antibody staining

Antibody HPA065505

  

Antibody HPA067322

  

Endothelial cells

 Not detected   Low  

Glandular cells

 Not detected   Low  
   
   

COLON - HPA RNA-seq

Average TPM

12.9
overview Male, age 54 Sample 1
TPM: 15.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 11.6
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 13.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 9.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 10.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 12.4
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 13
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 14.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 14.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 13.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 12.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 12.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

5.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 5.3
Samples: 149

Max RPKM: 8.8
Min RPKM: 2.8
Std RPKM: 1.0
Median RPKM: 5.3
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 8.8
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 8.7
GTEX-Y114-1626-SM-4TT7I 50-59 years, female 7.9
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 7.4
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 7.4
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 7.2
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 7.1
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 7.1
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 6.9
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 6.7
Show all
Colon - Transverse
RPKM: 5.1
Samples: 196

Max RPKM: 8.5
Min RPKM: 1.9
Std RPKM: 0.9
Median RPKM: 5.0
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 8.5
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 7.9
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 7.8
GTEX-Y114-1526-SM-4TT79 50-59 years, female 7.0
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 6.9
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 6.9
GTEX-SNOS-1226-SM-4DM5H 40-49 years, male 6.8
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 6.7
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 6.7
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 6.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

23.3

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 23.3
FF:10014-101C5 62,83,84 years, mixed 23.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.