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NT5C3B

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:11.7TPM
GTEx:17.3RPKM
FANTOM5:38.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not available
 

Antibody staining

Antibody HPA030786

  

Antibody HPA057095

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Medium   Not detected  

Peripheral nerve/ganglion

 Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

11.7
overview Male, age 54 Sample 1
TPM: 4.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 7.9
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 34.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 17.1
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 11
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 15.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 9.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 11.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 10
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 10.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

17.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 22.2
Samples: 149

Max RPKM: 38.8
Min RPKM: 13.6
Std RPKM: 4.3
Median RPKM: 21.8
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 38.8
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 36.5
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 30.8
GTEX-YJ8O-1426-SM-5PNV9 40-49 years, female 30.7
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 29.9
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 29.9
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 29.1
GTEX-139TS-2226-SM-5J2N1 60-69 years, male 28.9
GTEX-12BJ1-2026-SM-5FQUH 60-69 years, male 28.7
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 28.4
Show all
Colon - Transverse
RPKM: 13.6
Samples: 196

Max RPKM: 40.8
Min RPKM: 4.2
Std RPKM: 7.2
Median RPKM: 11.6
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 40.8
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 35.5
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 33.8
GTEX-13OW5-2626-SM-5MR3M 60-69 years, male 32.9
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 30.8
GTEX-TKQ1-0626-SM-4DXTS 30-39 years, male 29.8
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 28.9
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 27.1
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 26.7
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 26.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

38.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 38.0
FF:10014-101C5 62,83,84 years, mixed 38.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.