Tissue expression of ERBB2 - Staining in adipose tissue - The Human Protein Atlas

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ERBB2

TISSUE

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CELL

PATHOLOGY

TISSUE ATLAS PRIMARY DATA ADIPOSE TISSUE

GENE/PROTEIN

Antibody validation

Dictionary
	Soft tissue


Tissue proteome
	Adipose

SOFT TISSUE - Expression summary

Protein expression

h

m

l

n

RNA expression

HPA:	13.3	TPM
GTEx:	7.1	RPKM
FANTOM5:	13.8	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected
Chondrocytes:	Not available

Antibody staining	Antibody HPA001383		Antibody CAB000043		Antibody CAB020416		Antibody CAB062555
Adipocytes	Not detected		Not detected		Not detected		Not detected
Fibroblasts	Not detected		Not detected		Not detected
Peripheral nerve	Not detected
Chondrocytes	Not detected

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:	Not detected
Fibroblasts:	Not detected
Peripheral nerve:	Not detected
Chondrocytes:	Not detected

Antibody staining	Antibody HPA001383		Antibody CAB000043		Antibody CAB020416		Antibody CAB062555
Adipocytes	Not detected		Not detected		Not detected		Not detected
Fibroblasts	Low		Not detected		Not detected		Not detected
Peripheral nerve	Not detected		Not detected		Not detected
Chondrocytes	Not detected

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	13.3

N/A

Female, age 80

Sample 1
TPM: 9.4

Cell types%

Adipocytes: 95
Other cell types: 5

N/A

Female, age 45

Sample 2
TPM: 10.2

N/A

Female, age 57

Sample 3
TPM: 12

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 74

Sample 4
TPM: 27.4

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

overview

Female, age 59

Sample 5
TPM: 7.7

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	7.1

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 6.7

Samples: 350

Max RPKM: 20.6
Min RPKM: 1.8
Std RPKM: 2.7
Median RPKM: 6.1

GTEX-XOTO-0226-SM-4B66H

50-59 years, male

20.6

GTEX-11ONC-2526-SM-5986W

60-69 years, male

17.6

GTEX-OHPM-0226-SM-3LK61

50-59 years, male

15.8

GTEX-YECK-0226-SM-4W215

60-69 years, male

15.7

GTEX-11EQ8-0226-SM-5EQ5G

60-69 years, male

14.5

GTEX-145MF-0526-SM-5LUA6

50-59 years, male

14.5

GTEX-13OW6-0526-SM-5L3HY

50-59 years, male

14.2

GTEX-13N11-2626-SM-5K7UQ

50-59 years, female

14.0

GTEX-X638-0226-SM-47JZ9

70-79 years, female

14.0

GTEX-13QJ3-0426-SM-5RQHP

50-59 years, male

13.5

Show all

Adipose - Visceral (Omentum)
RPKM: 7.8

Samples: 227

Max RPKM: 20.2
Min RPKM: 1.5
Std RPKM: 4.0
Median RPKM: 6.7

GTEX-XOT4-0826-SM-4B66Y

60-69 years, female

20.2

GTEX-13OW7-1126-SM-5K7V6

50-59 years, male

18.2

GTEX-XLM4-1026-SM-4AT51

60-69 years, male

17.3

GTEX-14DAQ-2526-SM-5RQIO

60-69 years, female

17.2

GTEX-11NV4-1426-SM-5BC4W

60-69 years, male

17.1

GTEX-13S7M-0826-SM-5QGQX

60-69 years, female

17.1

GTEX-139TU-1426-SM-5LZY9

60-69 years, male

16.7

GTEX-WYVS-0626-SM-4SOJY

40-49 years, female

16.7

GTEX-12WSC-1726-SM-5GCN3

50-59 years, male

16.5

GTEX-13PL6-0926-SM-5KLYY

40-49 years, female

16.5

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	13.8

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 13.8

65,65,76 years, mixed

13.8

Contact

contact@proteinatlas.org

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.