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ERBB2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:69.8TPM
GTEx:25.1RPKM
FANTOM5:139.4Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody CAB000043

  

Antibody CAB020416

  

Antibody CAB062555

  

Endothelial cells

 Not detected   Not detected   Not detected  

Glandular cells

 Low   Not detected   Low  

Peripheral nerve/ganglion

 Not detected   Not detected   Not detected  
     
     
     

COLON - HPA RNA-seq

Average TPM

69.8
overview Male, age 54 Sample 1
TPM: 67
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 92.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 81.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 74.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 37.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 58
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 71.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 61.6
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 46
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 89.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 85.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 79.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 63.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

25.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 13.4
Samples: 149

Max RPKM: 29.4
Min RPKM: 5.1
Std RPKM: 3.7
Median RPKM: 13.4
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 29.4
GTEX-V955-1726-SM-4JBHF 60-69 years, male 22.5
GTEX-Y5LM-1426-SM-5RQJL 40-49 years, female 22.0
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 21.8
GTEX-145LS-2926-SM-5O99G 60-69 years, female 21.8
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 21.2
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 19.8
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 19.7
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 18.9
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 18.9
Show all
Colon - Transverse
RPKM: 34.0
Samples: 196

Max RPKM: 73.8
Min RPKM: 2.3
Std RPKM: 17.8
Median RPKM: 34.9
GTEX-Y5LM-1526-SM-4VDTA 40-49 years, female 73.8
GTEX-R55D-1826-SM-48FEF 50-59 years, male 73.4
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 72.6
GTEX-ZLV1-1226-SM-4WWBX 60-69 years, female 67.4
GTEX-13D11-0826-SM-5KLZJ 50-59 years, female 66.3
GTEX-U3ZN-2126-SM-4DXU1 30-39 years, female 64.6
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 64.2
GTEX-UPIC-1726-SM-4IHKG 20-29 years, female 63.6
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 63.1
GTEX-13O21-2426-SM-5MR4A 50-59 years, male 63.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

139.4

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 139.4
FF:10014-101C5 62,83,84 years, mixed 139.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.