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Gene name

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Reliability

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Validation

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Validation

Method

Validation

Method

Validation

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Expression

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Specificity

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Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

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Detectable

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Score

Score

Score

Antibodies

Column

 
 
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PATHOLOGY ATLAS MELANOMA

GENE/PROTEIN

Antibody validation

Dictionary

Melanoma

MELANOMA - Survival analysis

Best separation

Median separation

Expression cutoff

74.1 FPKM 67.9 FPKM

3-year survival high

51% 43%

3-year survival low

37% 38%

Log-rank P value

2.37e-1 5.10e-1

Interactive survival scatter plot (individual patient data)




Stage:



TCGA RNA samples

Average FPKM

69.8

Number of samples

102

Samples

Sample

Description

FPKM

TCGA-EB-A85I-01A 66 years, male, white, stage:iic 153.7
TCGA-EB-A4OZ-01A 42 years, female, white, stage:iiic 140.9
TCGA-EB-A3Y7-01A 86 years, female, white, stage:iiib 122.3
TCGA-EB-A3XE-01A 77 years, female, white, stage:iia 117.5
TCGA-IH-A3EA-01A 61 years, male, white, stage:iic 115.1
TCGA-EB-A6QZ-01A 76 years, female, white, stage:iia 113.3
TCGA-XV-AAZW-01A 62 years, female, white, stage:ii 112.5
TCGA-ER-A2NB-01A 57 years, male, white, stage:iiib 111.8
TCGA-EB-A3XC-01A 74 years, male, white, stage:iic 110.4
TCGA-XV-AAZY-01A 76 years, female, white, stage:iiic 106.2
TCGA-BF-A1Q0-01A 80 years, male, white, stage:iic 104.2
TCGA-EB-A5SF-01A 78 years, female, white, stage:iic 102.9
TCGA-BF-AAOU-01A 73 years, female, white, stage:iic 100.1
TCGA-EB-A3XD-01A 53 years, female, white, stage:iic 99.4
TCGA-BF-A1PX-01A 56 years, male, white, stage:iiib 96.9
TCGA-EB-A4OY-01A 65 years, female, white, stage:iiib 93.7
TCGA-EB-A3HV-01A 37 years, male, white, stage:iic 92.9
TCGA-BF-AAP7-01A 76 years, female, white, stage:iic 90.8
TCGA-XV-A9W2-01A 81 years, male, white, stage:i 89.6
TCGA-EB-A4IS-01A 77 years, male, white, stage:iib 88.7
TCGA-EB-A299-01A 63 years, male, white, stage:iia 88.3
TCGA-EB-A85J-01A 66 years, female, white, stage:iib 87.8
TCGA-EB-A44P-01A 58 years, female, white, stage:iic 85.5
TCGA-EB-A3XF-01A 57 years, male, white, stage:iic 85.2
TCGA-BF-A9VF-01A 77 years, male, white, stage:iic 84.9
TCGA-EB-A42Z-01A 49 years, male, asian, stage:iiic 83.9
TCGA-FR-A728-01A 54 years, female, white, stage:iiib 80.9
TCGA-BF-A3DJ-01A 36 years, female, white, stage:iiib 80.3
TCGA-GF-A769-01A 39 years, male, white, stage:iic 80.2
TCGA-EB-A97M-01A 66 years, male, white, stage:iic 79.2
TCGA-EB-A82B-01A 58 years, female, asian, stage:iii 79.0
TCGA-EB-A4P0-01A 82 years, male, white, stage:iic 78.4
TCGA-GN-A4U5-01A 61 years, female, white, stage:ib 78.2
TCGA-EB-A41A-01A 90 years, male, white, stage:iic 77.7
TCGA-BF-A1PU-01A 46 years, female, white, stage:iic 77.4
TCGA-ER-A194-01A 77 years, male, white 76.6
TCGA-EB-A5UM-01A 48 years, female, white, stage:iic 76.6
TCGA-EB-A3XB-01A 63 years, male, white, stage:ii 74.2
TCGA-EB-A5VU-01A 56 years, male, asian, stage:iiib 74.0
TCGA-GN-A263-01A 24 years, male, white, stage:iv 73.9
TCGA-BF-A3DM-01A 63 years, male, white, stage:iia 73.6
TCGA-BF-AAP2-01A 62 years, male, white, stage:iib 72.6
TCGA-GN-A26C-01A 77 years, male, white, stage:iiic 72.1
TCGA-BF-A1PZ-01A 71 years, female, white, stage:iib 71.3
TCGA-BF-AAP4-01A 61 years, male, white, stage:iic 71.2
TCGA-ER-A19K-01A 79 years, female, white, stage:iic 69.8
TCGA-XV-AAZV-01A 56 years, female, white, stage:ii 69.6
TCGA-XV-A9W5-01A 51 years, male, white, stage:i/ii nos 69.0
TCGA-BF-A5EO-01A 65 years, male, white, stage:iic 68.9
TCGA-EB-A1NK-01A 48 years, male, white, stage:iic 68.4
TCGA-EB-A550-01A 75 years, female, white, stage:iic 68.0
TCGA-EB-A44N-01A 59 years, male, white, stage:iic 67.7
TCGA-EB-A57M-01A 56 years, male, asian, stage:iiib 66.9
TCGA-HR-A5NC-01A 90 years, female 66.2
TCGA-D9-A4Z2-01A 50 years, male, white, stage:iiic 65.3
TCGA-WE-A8K4-01A 85 years, male, white, stage:iib 64.7
TCGA-BF-A3DL-01A 84 years, female, white, stage:iiib 64.0
TCGA-FS-A1ZN-01A 43 years, male, white, stage:iiia 63.3
TCGA-EB-A42Y-01A 73 years, female, asian, stage:iic 63.2
TCGA-EB-A6QY-01A 71 years, male, white, stage:iic 62.7
TCGA-BF-AAP8-01A 58 years, male, white, stage:iic 61.3
TCGA-BF-A5ER-01A 63 years, male, white, stage:iic 61.0
TCGA-BF-A5ES-01A 76 years, female, white, stage:iic 60.5
TCGA-GF-A2C7-01A 48 years, male, white, stage:iic 60.2
TCGA-EB-A6R0-01A 58 years, female, white, stage:iic 59.6
TCGA-EB-A5SE-01A 73 years, male, white, stage:iib 59.6
TCGA-BF-A1PV-01A 74 years, female, white, stage:iic 59.4
TCGA-BF-AAOX-01A 83 years, male, white, stage:iic 58.2
TCGA-BF-AAP6-01A 55 years, male, white, stage:iii 57.5
TCGA-YG-AA3N-01A 67 years, male, stage:iic 56.2
TCGA-ER-A196-01A 64 years, female, white, stage:iic 56.0
TCGA-BF-A5EQ-01A 63 years, male, white, stage:iic 55.6
TCGA-EB-A3Y6-01A 56 years, female, white, stage:iic 53.5
TCGA-EB-A4IQ-01A 42 years, female, asian, stage:iiib 52.7
TCGA-FR-A2OS-01A 49 years, female, white, stage:iic 52.7
TCGA-BF-A3DN-01A 81 years, female, white, stage:iiic 52.0
TCGA-EB-A24C-01A 56 years, male, white 51.9
TCGA-D9-A3Z4-01A 54 years, male, white, stage:iiic 51.8
TCGA-GN-A8LN-01A 68 years, male, white, stage:iic 51.6
TCGA-EB-A51B-01A 53 years, male, white, stage:iic 51.4
TCGA-EB-A4XL-01A 56 years, female, white, stage:iic 50.9
TCGA-XV-A9VZ-01A 90 years, female, white, stage:ii 50.5
TCGA-EB-A41B-01A 76 years, female, white, stage:iic 47.7
TCGA-ER-A2NF-01A 53 years, male, white, stage:iiib 47.4
TCGA-EB-A82C-01A 70 years, female, asian, stage:iic 46.5
TCGA-BF-A5EP-01A 75 years, female, white, stage:iiic 45.9
TCGA-FR-A726-01A 90 years, male, white, stage:iic 45.6
TCGA-EB-A551-01A 78 years, female, white, stage:iiic 45.4
TCGA-ER-A42H-01A 77 years, male, white 45.0
TCGA-EB-A44O-01A 69 years, male, white, stage:iib 41.8
TCGA-EB-A553-01A 62 years, male, white, stage:iic 41.8
TCGA-BF-AAP1-01A 86 years, male, white, stage:iic 40.7
TCGA-D9-A4Z3-01A 73 years, female, white, stage:iiic 40.6
TCGA-FR-A3R1-01A 69 years, male, white, stage:iic 38.4
TCGA-EB-A431-01A 34 years, male, white, stage:iic 37.9
TCGA-EB-A24D-01A 72 years, male, white, stage:iiib 37.4
TCGA-ER-A19T-01A 51 years, male, white, stage:iv 33.2
TCGA-DA-A960-01A 73 years, male, white, stage:iib 33.2
TCGA-FW-A5DX-01A 71 years, male, white, stage:iiic 32.7
TCGA-D9-A4Z5-01A 68 years, male, white, stage:iib 29.9
TCGA-EB-A5FP-01A 65 years, female, white, stage:iv 26.6
TCGA-D3-A5GT-01A 43 years, male, white, stage:iiic 22.1
Show all

MELANOMA - Protein expression

 

Antibody HPA023312

 Antibody staining
  High
  Medium
  Low
  Not detected
  
 Intensity
  Strong
  Moderate
  Weak
  Negative
  
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
  
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
  

Click images for details























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