We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
EPHA2
  • TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS BREAST

GENE/PROTEIN

Dictionary

Breast

BREAST - Expression summary

RNA expression

HPA:5.2TPM
GTEx:11.9RPKM
FANTOM5:3.1Tags Per Million

BREAST - Annotated protein expression

Pending normal tissue analysis


BREAST - HPA RNA-seq

Average TPM

5.2

overview Female, age 52 Sample 1
TPM: 7.4
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 8.3
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 2.4
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 2.7
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

11.9

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 11.9
Samples: 214

Max RPKM: 34.7
Min RPKM: 4.2
Std RPKM: 4.5
Median RPKM: 11.3
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 34.7
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 26.8
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 26.3
GTEX-RU72-0626-SM-46MUI 50-59 years, female 24.3
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 23.7
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 23.5
GTEX-117XS-1926-SM-5GICO 60-69 years, male 21.9
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 21.2
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 19.8
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 19.7
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 19.6
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 19.5
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 19.4
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 19.3
GTEX-R53T-1526-SM-48FEK 50-59 years, female 19.2
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 19.2
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 19.0
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 18.8
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 18.6
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 18.5
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 18.4
GTEX-11EI6-0626-SM-5985T 60-69 years, male 18.1
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 17.8
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 17.5
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 17.3
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 17.3
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 17.0
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 16.6
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 16.5
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 16.2
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 16.1
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 16.1
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 16.0
GTEX-R55D-0826-SM-48FEA 50-59 years, male 15.9
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 15.9
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 15.8
GTEX-TML8-1226-SM-32QON 40-49 years, female 15.8
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 15.8
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 15.7
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 15.6
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 15.6
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 15.5
GTEX-13113-1726-SM-5GCOO 60-69 years, female 15.3
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 15.2
GTEX-144GM-0926-SM-5O994 20-29 years, male 15.2
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 15.2
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 15.1
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 14.9
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 14.9
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 14.5
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 14.5
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 14.5
GTEX-1122O-1226-SM-5H113 60-69 years, female 14.4
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 14.4
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 14.0
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 13.8
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 13.8
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 13.8
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 13.7
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 13.6
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 13.6
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 13.6
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 13.5
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 13.5
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 13.4
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 13.4
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 13.4
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 13.4
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 13.3
GTEX-11P81-1926-SM-5BC53 30-39 years, female 13.2
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 13.2
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 13.2
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 13.1
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 13.0
GTEX-QVJO-1826-SM-447C9 60-69 years, female 12.9
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 12.9
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 12.9
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 12.8
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 12.8
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 12.7
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 12.6
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 12.5
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 12.4
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 12.4
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 12.3
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 12.2
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 12.2
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 12.2
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 12.2
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 12.1
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 12.0
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 11.9
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 11.9
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 11.9
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 11.9
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 11.8
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 11.8
GTEX-111YS-1926-SM-5GICC 60-69 years, male 11.6
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 11.6
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 11.5
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 11.5
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 11.4
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 11.4
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 11.4
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 11.4
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 11.4
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 11.3
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 11.3
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 11.3
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 11.2
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 11.2
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 11.0
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 10.9
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 10.9
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 10.8
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 10.8
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 10.8
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 10.8
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 10.7
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 10.6
GTEX-1192X-2326-SM-5987X 50-59 years, male 10.6
GTEX-11OF3-1926-SM-59889 60-69 years, male 10.6
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 10.6
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 10.6
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 10.5
GTEX-T6MN-0726-SM-32PML 50-59 years, male 10.5
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 10.5
GTEX-XBED-1626-SM-47JYN 60-69 years, male 10.5
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 10.4
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 10.4
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 10.3
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 10.2
GTEX-QEL4-2126-SM-447AE 50-59 years, male 10.2
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 10.2
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 10.2
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 10.1
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 10.0
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 10.0
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 10.0
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 9.8
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 9.7
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 9.7
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 9.7
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 9.6
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 9.6
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 9.6
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 9.6
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 9.5
GTEX-S341-1526-SM-4AD6K 40-49 years, female 9.4
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 9.2
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 9.2
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 9.1
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 9.1
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 9.1
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 8.9
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 8.8
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 8.8
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 8.7
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 8.7
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 8.6
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 8.6
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 8.4
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 8.4
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 8.4
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 8.4
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 8.3
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 8.3
GTEX-11P82-1326-SM-5HL62 20-29 years, male 8.2
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 8.2
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 8.1
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 8.1
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 8.0
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 7.9
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 7.9
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 7.8
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 7.8
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 7.7
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 7.7
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 7.7
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 7.7
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 7.6
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 7.6
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 7.5
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 7.5
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 7.4
GTEX-X261-0626-SM-3NMD9 50-59 years, male 7.4
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 7.4
GTEX-REY6-2426-SM-48FF5 60-69 years, male 7.3
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 7.3
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 7.3
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 7.1
GTEX-WFON-1826-SM-3GILG 40-49 years, male 7.1
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 7.1
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 7.0
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 6.8
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 6.7
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 6.6
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 6.4
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 6.3
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 6.1
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 5.8
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 5.8
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 5.8
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 5.7
GTEX-117YX-1426-SM-5H12H 50-59 years, male 5.5
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 5.5
GTEX-14753-2426-SM-5LU8U 60-69 years, male 5.3
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 5.3
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 5.2
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 5.0
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 4.7
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 4.5
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 4.3
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 4.2
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

3.1

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 3.1
FF:10080-102A8 77 years, female 3.1

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.