Tissue expression of HDGF - Staining in adipose tissue

SOFT TISSUE - Expression summary

Protein expression

RNA expression

HPA:	81.4	TPM
GTEx:	42.3	RPKM
FANTOM5:	73.2	Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Chondrocytes:	Medium
Fibroblasts:	High
Adipocytes:	Medium

Antibody staining	Antibody HPA048728	Antibody HPA053422	Antibody CAB026035
Chondrocytes	High	Medium
Fibroblasts	High	High	High
Adipocytes	High

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Fibroblasts:	High
Peripheral nerve:	High
Adipocytes:	Low

Antibody staining	Antibody HPA048728	Antibody HPA053422	Antibody CAB026035
Fibroblasts	High	High	High
Peripheral nerve	High	High	High
Adipocytes	High

ADIPOSE TISSUE - HPA RNA-seq

Average TPM	81.4

Female, age 80

Sample 1
TPM: 87.1

Cell types%

Adipocytes: 95
Other cell types: 5

Female, age 45

Sample 2
TPM: 63.2

Female, age 57

Sample 3
TPM: 60.8

Cell types%

Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5

Female, age 74

Sample 4
TPM: 113.7

Cell types%

Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5

Female, age 59

Sample 5
TPM: 82

Cell types%

Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM	42.3

GTEx sample id

Sample description

RPKM

Adipose - Subcutaneous
RPKM: 41.2

Samples: 350

Max RPKM: 74.6
Min RPKM: 24.8
Std RPKM: 8.2
Median RPKM: 39.5

GTEX-QESD-1526-SM-2S1QT

20-29 years, male

74.6

GTEX-R55G-2426-SM-2TC5I

40-49 years, female

65.3

GTEX-11EMC-2826-SM-5PNY6

60-69 years, female

64.8

GTEX-11I78-2626-SM-5Q5AI

50-59 years, female

64.6

GTEX-X4XY-0326-SM-46MVZ

60-69 years, male

64.1

GTEX-XK95-0426-SM-4AT4R

40-49 years, male

62.9

GTEX-ZYVF-0226-SM-5GIEG

50-59 years, female

62.7

GTEX-NPJ8-0226-SM-48TBN

40-49 years, male

62.2

GTEX-S3XE-1626-SM-3K2AJ

50-59 years, male

61.8

GTEX-X15G-2326-SM-4PQZS

50-59 years, female

61.4

Show all

Adipose - Visceral (Omentum)
RPKM: 43.9

Samples: 227

Max RPKM: 92.3
Min RPKM: 24.5
Std RPKM: 11.0
Median RPKM: 41.8

GTEX-ZYVF-1026-SM-5E44V

50-59 years, female

92.3

GTEX-13IVO-2426-SM-5K7V9

70-79 years, male

85.4

GTEX-U8XE-1926-SM-3DB98

30-39 years, male

82.0

GTEX-13X6H-1726-SM-5Q5EH

50-59 years, female

78.4

GTEX-ZAJG-1626-SM-5HL7I

50-59 years, female

76.9

GTEX-13PVQ-2226-SM-5L3G9

50-59 years, male

70.7

GTEX-13S86-0926-SM-5SI6I

40-49 years, male

70.6

GTEX-132QS-0826-SM-5K7WV

60-69 years, male

69.5

GTEX-13N1W-1226-SM-5K7UM

70-79 years, male

69.1

GTEX-11WQK-1526-SM-5EGKN

50-59 years, male

66.9

Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million	73.2

FANTOM5 sample id

Sample description

Tags Per Million

Adipose tissue
Tags Per Million: 73.2

FF:10010-101C1

65,65,76 years, mixed

73.2