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SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:24.9TPM
GTEx:17.1RPKM
FANTOM5:37.0Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Medium
 

Antibody staining

Antibody HPA001759

  

Antibody CAB004318

  

Adipocytes

 Medium   Medium  

Fibroblasts

 Medium   Medium  

Peripheral nerve

 Medium  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Medium
Peripheral nerve:Low
 

Antibody staining

Antibody HPA001759

  

Antibody CAB004318

  

Adipocytes

 Medium   Not detected  

Fibroblasts

 Medium   Medium  

Peripheral nerve

 Medium   Not detected  
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

24.9
N/A Female, age 80 Sample 1
TPM: 23.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 18.2
N/A Female, age 57 Sample 3
TPM: 15.8
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 34.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 32.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

17.1

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 18.5
Samples: 350

Max RPKM: 32.9
Min RPKM: 10.0
Std RPKM: 3.4
Median RPKM: 18.3
GTEX-TSE9-0226-SM-3DB84 60-69 years, female 32.9
GTEX-14E6C-0226-SM-5S2N3 40-49 years, male 30.0
GTEX-13OVI-1326-SM-5IJBO 60-69 years, female 28.2
GTEX-RVPU-2326-SM-2TF6R 50-59 years, male 27.4
GTEX-139D8-0326-SM-5IJCJ 30-39 years, female 26.8
GTEX-OXRN-0226-SM-2I5EJ 50-59 years, male 26.7
GTEX-1211K-2226-SM-5FQU6 60-69 years, female 26.5
GTEX-ZEX8-2326-SM-5S2MN 50-59 years, male 26.1
GTEX-OOBJ-0226-SM-2YUMM 60-69 years, male 26.0
GTEX-P4QT-0226-SM-3LK68 50-59 years, female 26.0
Show all
Adipose - Visceral (Omentum)
RPKM: 15.0
Samples: 227

Max RPKM: 23.0
Min RPKM: 7.0
Std RPKM: 3.3
Median RPKM: 14.7
GTEX-113JC-0726-SM-5GZZR 50-59 years, female 23.0
GTEX-14753-2526-SM-5LU97 60-69 years, male 23.0
GTEX-XLM4-1026-SM-4AT51 60-69 years, male 22.6
GTEX-139TU-1426-SM-5LZY9 60-69 years, male 22.5
GTEX-ZYW4-2226-SM-5GZYG 60-69 years, male 21.6
GTEX-1117F-1326-SM-5EGHH 60-69 years, female 21.4
GTEX-13O3P-0926-SM-5IFFI 50-59 years, male 21.4
GTEX-X8HC-2326-SM-4QAS4 50-59 years, female 21.4
GTEX-11ZTS-1326-SM-5EQMA 60-69 years, female 21.3
GTEX-13S7M-0826-SM-5QGQX 60-69 years, female 21.3
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

37.0

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 37.0
FF:10010-101C1 65,65,76 years, mixed 37.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.