Tissue expression of SLC39A1 - Staining in cerebral cortex

CEREBRAL CORTEX - Expression summary

RNA expression

HPA:	31.3	TPM
GTEx:	9.8	RPKM

CEREBRAL CORTEX - Annotated protein expression
Pending normal tissue analysis

CEREBRAL CORTEX - HPA RNA-seq

Average TPM	31.3

Male, age 5

Sample 1
TPM: 26.5

Female, age 40

Sample 2
TPM: 33.1

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

Male, age 70

Sample 3
TPM: 34.2

Cell types%

Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM	9.8

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 10.5

Samples: 114

Max RPKM: 23.9
Min RPKM: 4.7
Std RPKM: 4.0
Median RPKM: 9.4

GTEX-11WQK-3026-SM-5EQL6

50-59 years, male

23.9

GTEX-144FL-3026-SM-5O99C

50-59 years, male

23.6

GTEX-ZZPT-3026-SM-5GZXH

50-59 years, male

21.9

GTEX-13NYS-3126-SM-5KLYV

60-69 years, male

20.9

GTEX-13OVJ-2826-SM-5L3GW

50-59 years, female

20.9

GTEX-NPJ8-1526-SM-2D7VU

40-49 years, male

19.4

GTEX-X585-3026-SM-46MWF

50-59 years, male

19.2

GTEX-11TTK-2926-SM-5PNYP

60-69 years, female

18.4

GTEX-11OC5-0726-SM-5P9JK

60-69 years, male

17.8

GTEX-13NYC-2826-SM-5K7WR

60-69 years, male

17.4

Show all

Brain - Frontal Cortex (BA9)
RPKM: 9.2

Samples: 108

Max RPKM: 36.2
Min RPKM: 4.2
Std RPKM: 4.3
Median RPKM: 8.0

GTEX-13N2G-0011-R10a-SM-5MR34

60-69 years, male

36.2

GTEX-13OVJ-0011-R10b-SM-5L3HT

50-59 years, female

20.3

GTEX-X4EP-0011-R10B-SM-4QASJ

60-69 years, female

20.3

GTEX-11WQK-0011-R10a-SM-5BC6R

50-59 years, male

20.2

GTEX-1445S-0011-R10a-SM-5PNWB

60-69 years, male

17.4

GTEX-NPJ8-0011-R10A-SM-2YUMO

40-49 years, male

16.9

GTEX-XMD1-0011-R10A-SM-4AT4A

60-69 years, male

16.7

GTEX-NL4W-0011-R10A-SM-2I3DY

50-59 years, male

16.2

GTEX-13NYS-0011-R10a-SM-5MR4S

60-69 years, male

15.9

GTEX-12WSA-0011-R10b-SM-5P9ET

60-69 years, male

15.6

Show all

CEREBRAL CORTEX - FANTOM5 CAGE
No Fantom CAGE analysis found for this gene / tissue