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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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RIT1
  • TISSUE

  • CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

RIT1

Gene description

Ras-like without CAAX 1

Protein class

Cancer-related genes
Disease related genes
Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

4
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Cytoplasmic expression in several tissues.

ANTIBODY IHC RELIABILITY

Data reliability
description

Pending external verification.

Reliability score

Approved based on 1 antibody.
HPA053249
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PROGNOSTIC SUMMARY

Prognostic marker in liver cancer (unfavourable).
Liver cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA053249

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Malignant tissues showed weak to moderate cytoplasmic staining. Few cases of papillary adenocarcinomas of thyroid, colorectal, prostate, ovarian cancers along with occasional cases of melanomas, cholangiocarcinomas, endometrial and pancreatic cancers displayed strong positivity.

GENE INFORMATION

Gene name

RIT1 (HGNC Symbol)

Synonyms

MGC125864, MGC125865, RIBB, RIT, ROC1

Description

Ras-like without CAAX 1 (HGNC Symbol)

Entrez gene summary

This gene encodes a member of a subfamily of Ras-related GTPases. The encoded protein is involved in regulating p38 MAPK-dependent signaling cascades related to cellular stress. This protein also cooperates with nerve growth factor to promote neuronal development and regeneration. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Feb 2012]

Chromosome

1

Cytoband

q22

Chromosome location (bp)

155897808 - 155911404

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000143622 (version 83.38)

Entrez gene

6016

UniProt

Q92963 (UniProt - Evidence at protein level)

neXtProt

NX_Q92963

Antibodypedia

RIT1 antibodies

PROTEIN BROWSER

RIT1-001
RIT1-002
RIT1-005
RIT1-006

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

RIT1-001
ENSP00000357306
ENST00000368323
Q92963 [Direct mapping]
GTP-binding protein Rit1
Show all
Predicted intracellular proteins
Cancer-related genes
   Mutated cancer genes
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003924 [GTPase activity]
GO:0005515 [protein binding]
GO:0005516 [calmodulin binding]
GO:0005525 [GTP binding]
GO:0005622 [intracellular]
GO:0005886 [plasma membrane]
GO:0006886 [intracellular protein transport]
GO:0006913 [nucleocytoplasmic transport]
GO:0007165 [signal transduction]
GO:0007264 [small GTPase mediated signal transduction]
GO:0007265 [Ras protein signal transduction]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0048011 [neurotrophin TRK receptor signaling pathway]
Show all
219 aa
25.1 kDa
No 0
RIT1-002
ENSP00000357305
ENST00000368322
Q92963 [Direct mapping]
GTP-binding protein Rit1
Show all
Predicted intracellular proteins
Cancer-related genes
   Mutated cancer genes
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0003924 [GTPase activity]
GO:0005515 [protein binding]
GO:0005516 [calmodulin binding]
GO:0005525 [GTP binding]
GO:0005622 [intracellular]
GO:0005886 [plasma membrane]
GO:0006886 [intracellular protein transport]
GO:0006913 [nucleocytoplasmic transport]
GO:0007165 [signal transduction]
GO:0007264 [small GTPase mediated signal transduction]
GO:0007265 [Ras protein signal transduction]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0048011 [neurotrophin TRK receptor signaling pathway]
Show all
236 aa
27.1 kDa
No 0
RIT1-005
ENSP00000441950
ENST00000539040
Q92963 [Direct mapping]
GTP-binding protein Rit1
Show all
Predicted intracellular proteins
Cancer-related genes
   Mutated cancer genes
Disease related genes
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005515 [protein binding]
GO:0005516 [calmodulin binding]
GO:0005525 [GTP binding]
GO:0005622 [intracellular]
GO:0005886 [plasma membrane]
GO:0007165 [signal transduction]
GO:0007264 [small GTPase mediated signal transduction]
GO:0007265 [Ras protein signal transduction]
GO:0015031 [protein transport]
GO:0016020 [membrane]
GO:0048011 [neurotrophin TRK receptor signaling pathway]
Show all
183 aa
21.6 kDa
No 0
RIT1-006
ENSP00000476612
ENST00000609492
V9GYC3 [Direct mapping]
GTP-binding protein Rit1
Show all
Predicted intracellular proteins
Cancer-related genes
   Mutated cancer genes
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005525 [GTP binding]
GO:0005622 [intracellular]
GO:0007165 [signal transduction]
GO:0007264 [small GTPase mediated signal transduction]
GO:0015031 [protein transport]
GO:0016020 [membrane]
Show all
151 aa
17 kDa
No 0

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