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SOX13

SOFT TISSUE - Expression summary

RNA expression
HPA:19.7TPM
GTEx:15.3RPKM
FANTOM5:45.7Tags Per Million

SOFT TISSUE - Annotated protein expression

Pending normal tissue analysis

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

19.7
N/A Female, age 80 Sample 1
TPM: 20.6
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 23.5
N/A Female, age 57 Sample 3
TPM: 20.5
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 18.8
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 15.1
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

15.3

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 18.0
Samples: 350

Max RPKM: 44.7
Min RPKM: 4.4
Std RPKM: 6.4
Median RPKM: 17.1
GTEX-131XF-2226-SM-5EQKG 60-69 years, male 44.7
GTEX-11P7K-2026-SM-5GU74 30-39 years, male 41.5
GTEX-RVPU-2326-SM-2TF6R 50-59 years, male 38.8
GTEX-XQ8I-0526-SM-4BOPS 50-59 years, male 36.5
GTEX-12WSM-0226-SM-5LZV6 60-69 years, male 34.2
GTEX-146FR-1826-SM-5QGPF 60-69 years, female 33.9
GTEX-NFK9-0326-SM-3MJGV 40-49 years, male 33.9
GTEX-14C5O-0226-SM-5SI6O 60-69 years, male 33.4
GTEX-YEC3-1226-SM-5IFI8 50-59 years, male 33.4
GTEX-RTLS-0226-SM-2TF5E 60-69 years, female 30.8
Show all
Adipose - Visceral (Omentum)
RPKM: 11.2
Samples: 227

Max RPKM: 28.8
Min RPKM: 2.7
Std RPKM: 4.2
Median RPKM: 10.8
GTEX-XQ8I-1426-SM-4BOPW 50-59 years, male 28.8
GTEX-X3Y1-0926-SM-3P5YT 40-49 years, male 23.2
GTEX-13S7M-0826-SM-5QGQX 60-69 years, female 22.7
GTEX-11NUK-2026-SM-5PNVZ 50-59 years, male 20.2
GTEX-13OW6-2426-SM-5K7WO 50-59 years, male 20.0
GTEX-WL46-2026-SM-3LK7U 50-59 years, male 19.4
GTEX-11DYG-2026-SM-5EGGX 60-69 years, male 19.3
GTEX-WXYG-0926-SM-3NB2O 50-59 years, female 19.2
GTEX-X585-2526-SM-4QAS1 50-59 years, male 19.0
GTEX-11VI4-1226-SM-5EQMP 40-49 years, female 18.9
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

45.7

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 45.7
FF:10010-101C1 65,65,76 years, mixed 45.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.