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COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.9TPM
GTEx:2.3RPKM
FANTOM5:6.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA044512

  

Endothelial cells

 Not detected  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 

COLON - HPA RNA-seq

Average TPM

2.9
overview Male, age 54 Sample 1
TPM: 3.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 5.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 2.8
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 3.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 2.2
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 2.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 3.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 3.3
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

2.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 2.7
Samples: 149

Max RPKM: 7.3
Min RPKM: 0.3
Std RPKM: 1.3
Median RPKM: 2.5
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 7.3
GTEX-XV7Q-2226-SM-4BRVY 40-49 years, female 7.1
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 6.6
GTEX-111YS-1826-SM-5GIEP 60-69 years, male 6.1
GTEX-XUZC-1526-SM-4BRV4 30-39 years, female 6.1
GTEX-13111-1926-SM-5GCOL 50-59 years, male 5.5
GTEX-139T6-1426-SM-5P9J7 50-59 years, male 5.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 5.2
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 4.6
GTEX-XUW1-1826-SM-4BOQD 50-59 years, female 4.6
Show all
Colon - Transverse
RPKM: 2.0
Samples: 196

Max RPKM: 9.9
Min RPKM: 0.2
Std RPKM: 1.8
Median RPKM: 1.3
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 9.9
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 9.5
GTEX-YEC4-1926-SM-5IFHJ 40-49 years, male 9.3
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 8.6
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 8.4
GTEX-Y114-1526-SM-4TT79 50-59 years, female 8.0
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 6.5
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 6.4
GTEX-OXRL-1426-SM-3NM9E 50-59 years, male 6.4
GTEX-U3ZH-1326-SM-4DXSF 30-39 years, male 5.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

6.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 6.5
FF:10014-101C5 62,83,84 years, mixed 6.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.