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CCNA2

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:9.8TPM
GTEx:3.1RPKM
FANTOM5:9.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA020626

  

Antibody CAB000114

  

Endothelial cells

 Not detected   Not detected  

Glandular cells

 Low   Medium  

Peripheral nerve/ganglion

 Not detected   Not detected  
   
   
   

COLON - HPA RNA-seq

Average TPM

9.8
overview Male, age 54 Sample 1
TPM: 10.4
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 6.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 11.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 7.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 5
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 9.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 16.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 9.2
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 11.8
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 17.4
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 9.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

3.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.9
Samples: 149

Max RPKM: 9.4
Min RPKM: 0.2
Std RPKM: 1.5
Median RPKM: 1.4
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 9.4
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 7.6
GTEX-ZF28-2526-SM-57WFH 60-69 years, male 6.3
GTEX-13OW5-2826-SM-5KM1G 60-69 years, male 5.9
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 5.7
GTEX-ZC5H-2426-SM-4WAZ6 40-49 years, female 5.5
GTEX-V955-1726-SM-4JBHF 60-69 years, male 5.4
GTEX-13N2G-2226-SM-5IJCU 60-69 years, male 5.3
GTEX-ZVT4-2626-SM-5N9GJ 50-59 years, female 4.9
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 4.5
Show all
Colon - Transverse
RPKM: 4.1
Samples: 196

Max RPKM: 17.9
Min RPKM: 0.1
Std RPKM: 3.3
Median RPKM: 3.1
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 17.9
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 17.2
GTEX-144GN-1126-SM-5LU33 50-59 years, male 14.3
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 13.8
GTEX-OXRK-1726-SM-3NB16 50-59 years, female 13.4
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 13.1
GTEX-139YR-2126-SM-5KM11 50-59 years, male 12.2
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 12.0
GTEX-XMK1-1726-SM-4B64Z 40-49 years, male 11.9
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 11.6
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

9.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 9.0
FF:10014-101C5 62,83,84 years, mixed 9.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.