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G3BP1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:41.1TPM
GTEx:9.9RPKM
FANTOM5:92.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
 

Antibody staining

Antibody HPA004052

  

Antibody CAB037068

  

Endothelial cells

 Medium   Medium  

Glandular cells

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

41.1
overview Male, age 54 Sample 1
TPM: 37.8
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 38.1
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 36.2
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 46.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 34.7
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 38.2
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 57.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 39.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 41.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 46.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 45.7
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 45
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 27.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

9.9

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 9.0
Samples: 149

Max RPKM: 20.2
Min RPKM: 5.7
Std RPKM: 2.0
Median RPKM: 8.6
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 20.2
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 16.2
GTEX-YJ8A-1726-SM-5P9IQ 20-29 years, male 14.6
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 13.5
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 13.5
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 13.1
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 13.0
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 12.6
GTEX-14E6C-2226-SM-5QGQG 40-49 years, male 12.4
GTEX-139D8-2926-SM-5IJBM 30-39 years, female 12.2
Show all
Colon - Transverse
RPKM: 10.6
Samples: 196

Max RPKM: 21.6
Min RPKM: 5.3
Std RPKM: 2.1
Median RPKM: 10.3
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 21.6
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 19.0
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 17.6
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 17.2
GTEX-144GM-1226-SM-5LU52 20-29 years, male 15.6
GTEX-ZY6K-1226-SM-5GZYL 50-59 years, male 14.8
GTEX-1128S-1626-SM-5H12O 60-69 years, female 14.5
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 14.4
GTEX-13O3P-2326-SM-5KM55 50-59 years, male 14.3
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 14.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

92.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 92.0
FF:10014-101C5 62,83,84 years, mixed 92.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.