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SLC17A4
  • TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA

GENE/PROTEIN

Antibody validation


Dictionary


Tissue proteome

GENERAL INFORMATION

Gene name

SLC17A4

Gene description

Solute carrier family 17, member 4

Protein class

Predicted membrane proteins
Transporters

Predicted localization

Membrane

Number of transcripts

3
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category

HPA:Group enriched (colon, duodenum, gallbladder, liver, rectum, small intestine)
GTEx:Group enriched (colon, liver, pancreas, small intestine)
FANTOM5:Group enriched (colon, gallbladder, liver, pancreas, small intestine)

Protein evidence

Evidence at transcript level

Protein expression

Membranous expression in several tissues including liver and small intestines.

DATA RELIABILITY

Data reliability
description

Antibody staining mainly not consistent with RNA expression data. Presumed off target binding observed and disregarded.

Reliability score

Approved based on 1 antibody.
HPA055564
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY

RNA expression (TPM) Protein expression (score)
Brain
Cerebral cortex
Hippocampus
N/A
Caudate
N/A
Cerebellum
N/A
Endocrine tissues
Thyroid gland
Parathyroid gland
Adrenal gland
Bone marrow & immune system
Appendix
Bone marrow
Lymph node
Tonsil
Spleen
Muscle tissues
Heart muscle
Skeletal muscle
Smooth muscle
Lung
Nasopharynx
N/A
Bronchus
N/A
Lung
Liver & gallbladder
Liver
Gallbladder
Pancreas
Pancreas
Gastrointestinal tract
Oral mucosa
N/A
Salivary gland
Esophagus
Stomach
Duodenum
Small intestine
Colon
Rectum
Kidney & urinary bladder
Kidney
Urinary bladder
Male tissues
Testis
Epididymis
Prostate
Seminal vesicle
Female tissues
Breast
Vagina
N/A
Cervix, uterine
Endometrium
Fallopian tube
Ovary
Placenta
Adipose & soft tissue
Adipose tissue
Soft tissue
N/A
Skin
Skin
Cerebral cortex

Lymph node

Liver

Duodenum

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW

Organ
Expression
Alphabetical

RNA EXPRESSION OVERVIEW

HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (colon, duodenum, gallbladder, liver, rectum, small intestine)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (colon, liver, pancreas, small intestine)
FANTOM5 dataset
Organ
Expression
Alphabetical
RNA tissue category: Group enriched (colon, gallbladder, liver, pancreas, small intestine)

GENE INFORMATION

Gene name

SLC17A4 (HGNC Symbol)

Synonyms

KIAA2138

Description

Solute carrier family 17, member 4 (HGNC Symbol)

Entrez gene summary

Phosphate homeostasis is maintained by regulating intake, intestinal absorption, bone deposition and resorption, and renal excretion of phosphate. The central molecule in the control of phosphate excretion from the kidney is the sodium/phosphate cotransporter NPT1 (SLC17A1; MIM 182308), which is located in the renal proximal tubule. NPT1 uses the transmembrane electrochemical potential gradient of sodium to transport phosphate across the cell membrane. SLC17A4 is a similar sodium/phosphate cotransporter in the intestinal mucosa that plays an important role in the absorption of phosphate from the intestine (summary by Shibui et al., 1999 [PubMed 10319585]).[supplied by OMIM, Feb 2011]

Chromosome

6

Cytoband

p22.2

Chromosome location (bp)

25754699 - 25781191

Protein evidence

Evidence at transcript level (all genes)

Ensembl

ENSG00000146039 (version 83.38)

Entrez gene

10050

UniProt

Q9Y2C5 (UniProt - Evidence at transcript level)

neXtProt

NX_Q9Y2C5

Antibodypedia

SLC17A4 antibodies

PROTEIN BROWSER

SLC17A4-001
SLC17A4-201
SLC17A4-202

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

SLC17A4-001
ENSP00000367137
ENST00000377905
Q9Y2C5 [Direct mapping]
Probable small intestine urate exporter
A0A024R013 [Target identity:100%; Query identity:100%]
Solute carrier family 17 (Sodium phosphate), member 4, isoform CRA_a
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Show all
GO:0005436 [sodium:phosphate symporter activity]
GO:0005887 [integral component of plasma membrane]
GO:0006796 [phosphate-containing compound metabolic process]
GO:0006814 [sodium ion transport]
GO:0015321 [sodium-dependent phosphate transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016324 [apical plasma membrane]
GO:0035435 [phosphate ion transmembrane transport]
GO:0035725 [sodium ion transmembrane transport]
GO:0044341 [sodium-dependent phosphate transport]
GO:0055085 [transmembrane transport]
Show all
497 aa
54.1 kDa
No >9
SLC17A4-201
ENSP00000380266
ENST00000397076
Q9Y2C5 [Direct mapping]
Probable small intestine urate exporter
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   5TM proteins predicted by MDM
Show all
GO:0005436 [sodium:phosphate symporter activity]
GO:0005887 [integral component of plasma membrane]
GO:0006796 [phosphate-containing compound metabolic process]
GO:0006814 [sodium ion transport]
GO:0015321 [sodium-dependent phosphate transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016324 [apical plasma membrane]
GO:0035435 [phosphate ion transmembrane transport]
GO:0035725 [sodium ion transmembrane transport]
GO:0044341 [sodium-dependent phosphate transport]
Show all
221 aa
24.2 kDa
No 5
SLC17A4-202
ENSP00000391345
ENST00000439485
Q9Y2C5 [Direct mapping]
Probable small intestine urate exporter
Show all
Transporters
   Electrochemical Potential-driven transporters
Predicted membrane proteins
   Prediction method-based
   Membrane proteins predicted by MDM
   MEMSAT3 predicted membrane proteins
   MEMSAT-SVM predicted membrane proteins
   Phobius predicted membrane proteins
   SCAMPI predicted membrane proteins
   SPOCTOPUS predicted membrane proteins
   THUMBUP predicted membrane proteins
   TMHMM predicted membrane proteins
   # TM segments-based
   >9TM proteins predicted by MDM
Show all
GO:0005436 [sodium:phosphate symporter activity]
GO:0005887 [integral component of plasma membrane]
GO:0006796 [phosphate-containing compound metabolic process]
GO:0006814 [sodium ion transport]
GO:0015321 [sodium-dependent phosphate transmembrane transporter activity]
GO:0016020 [membrane]
GO:0016021 [integral component of membrane]
GO:0016324 [apical plasma membrane]
GO:0035435 [phosphate ion transmembrane transport]
GO:0035725 [sodium ion transmembrane transport]
GO:0044341 [sodium-dependent phosphate transport]
GO:0055085 [transmembrane transport]
Show all
443 aa
48.3 kDa
No >9

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