We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
Fields »
 

Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
ABOUT
HELP
BLOG
  • THE HUMAN PROTEOME
  • THE HUMAN TISSUES
  • THE HUMAN CELL
  • HUMAN PATHOLOGY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
    • NEWS
    • BLOG
    • EVENTS
    • PRESS ROOM
    • LEARN
    • DICTIONARY
    • METHODS
    • CELL LINES
  • THE PROJECT
  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • PUBLICATION DATA
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • LINKS
  • CONTACT
  • TECHNICAL DATA
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • DOWNLOADABLE DATA
  • HELP & FAQ
  • LICENCE & CITATION
  • PRIVACY STATEMENT
  • RELEASE HISTORY
SLC17A4
  • TISSUE

  • CELL

  • PATHOLOGY

TISSUE ATLAS PRIMARY DATA LIVER

GENE/PROTEIN

Antibody validation


Dictionary

Liver

Tissue proteome

Liver

LIVER - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:22.4TPM
GTEx:14.4RPKM
FANTOM5:7.1Tags Per Million

LIVER - Annotated protein expression

Annotated protein
expression

Bile duct cells:Medium
Hepatocytes:High
 

Antibody staining

Antibody HPA055564

 

Bile duct cells

Medium  

Hepatocytes

High  
 
 
 

LIVER - HPA RNA-seq

Average TPM

22.4

N/A Female, age 60 Sample 1
TPM: 13
overview Male, age 54 Sample 2
TPM: 17.4
Cell types%
Hepatocytes: 80
Fibroblasts: 15
Other cell types: 5
overview Male, age 74 Sample 3
TPM: 28.4
Cell types%
Hepatocytes: 85
Fibroblasts: 5
Other cell types: 10
overview Female, age 62 Sample 4
TPM: 22.2
Cell types%
Hepatocytes: 70
Fibroblasts: 10
Other cell types: 20
overview Male, age 78 Sample 5
TPM: 17.5
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Male, age 53 Sample 6
TPM: 53.4
Cell types%
Hepatocytes: 80
Fibroblasts: 5
Other cell types: 15
overview Male, age 77 Sample 7
TPM: 18.9
Cell types%
Hepatocytes: 75
Fibroblasts: 5
Other cell types: 20
overview Female, age 72 Sample 8
TPM: 15.7
Cell types%
Hepatocytes: 50
Fibroblasts: 10
Other cell types: 40
overview Male, age 70 Sample 9
TPM: 22.6
Cell types%
Hepatocytes: 65
Fibroblasts: 10
Other cell types: 25
overview Female, age 23 Sample 10
TPM: 15.2
Cell types%
Hepatocytes: 70
Fibroblasts: 5
Other cell types: 25

LIVER - GTEx RNA-seq

Average RPKM

14.4

GTEx sample id

Sample description

RPKM

Liver
RPKM: 14.4
Samples: 119

Max RPKM: 59.1
Min RPKM: 0.3
Std RPKM: 12.1
Median RPKM: 11.0
GTEX-11NV4-1326-SM-5HL6V 60-69 years, male 59.1
GTEX-11NUK-1226-SM-5P9GM 50-59 years, male 58.0
GTEX-11OF3-0726-SM-5BC4Z 60-69 years, male 49.9
GTEX-ZVT3-1626-SM-5GU66 60-69 years, female 41.2
GTEX-1399T-0826-SM-5IFES 60-69 years, male 41.1
GTEX-13OW6-2626-SM-5IFF2 50-59 years, male 40.5
GTEX-13SLX-1226-SM-5S2Q6 50-59 years, female 39.3
GTEX-13NYB-1026-SM-5IFH3 40-49 years, male 37.0
GTEX-T6MN-1226-SM-3NMA5 50-59 years, male 37.0
GTEX-WZTO-0626-SM-4PQYY 40-49 years, male 36.3
GTEX-13FTZ-0726-SM-5IFFY 60-69 years, male 36.1
GTEX-12WSI-0226-SM-5GCNA 50-59 years, male 34.6
GTEX-13112-1426-SM-5EGH8 50-59 years, male 33.7
GTEX-RNOR-1426-SM-48FDJ 50-59 years, female 33.7
GTEX-RN64-1826-SM-48FDV 50-59 years, male 33.6
GTEX-12WSD-1426-SM-5GCN9 60-69 years, female 33.3
GTEX-145LU-1326-SM-5LU9N 50-59 years, male 32.3
GTEX-SJXC-1226-SM-4DM78 60-69 years, male 25.7
GTEX-13VXU-0926-SM-5IFFH 50-59 years, male 24.2
GTEX-11ZTS-1426-SM-5EQMM 60-69 years, female 23.8
GTEX-1212Z-0226-SM-59HLF 60-69 years, male 23.6
GTEX-12ZZZ-1326-SM-59HKW 60-69 years, male 23.5
GTEX-131YS-1626-SM-5HL6C 60-69 years, female 21.8
GTEX-11WQC-0726-SM-5EQMR 60-69 years, male 21.6
GTEX-11GSP-0626-SM-5986T 60-69 years, female 19.7
GTEX-YECK-1926-SM-4W21H 60-69 years, male 19.4
GTEX-11EQ9-0526-SM-5A5JZ 30-39 years, male 19.0
GTEX-XBEC-1526-SM-4AT68 50-59 years, male 19.0
GTEX-Y5V5-0926-SM-4VBPZ 60-69 years, female 18.7
GTEX-11DXZ-0126-SM-5EGGY 50-59 years, male 18.4
GTEX-ZYT6-0626-SM-5E45V 30-39 years, male 17.7
GTEX-S33H-1626-SM-4AD68 30-39 years, male 17.0
GTEX-11ZUS-2526-SM-59872 30-39 years, male 16.9
GTEX-11DXY-0526-SM-5EGGQ 60-69 years, male 16.6
GTEX-147JS-1126-SM-5RQIW 60-69 years, male 15.7
GTEX-13113-1326-SM-5GCOI 60-69 years, female 15.2
GTEX-ZAB4-0826-SM-5LU9D 40-49 years, male 15.1
GTEX-QESD-2026-SM-447BI 20-29 years, male 14.9
GTEX-13FLV-0326-SM-5N9DJ 50-59 years, male 14.5
GTEX-13FTW-1126-SM-5J2NV 40-49 years, male 14.5
GTEX-147F4-1426-SM-5LUA8 50-59 years, male 14.4
GTEX-Q734-0326-SM-48U15 40-49 years, female 14.1
GTEX-145MF-0826-SM-5QGQA 50-59 years, male 14.0
GTEX-QEG4-1826-SM-4R1JN 30-39 years, male 13.7
GTEX-14AS3-0126-SM-5Q5F4 40-49 years, female 13.5
GTEX-131XH-0626-SM-5LZWH 50-59 years, male 13.2
GTEX-ZVT4-0626-SM-5E45T 50-59 years, female 13.2
GTEX-UPIC-0926-SM-4IHLV 20-29 years, female 13.1
GTEX-11ZVC-0726-SM-5FQT9 50-59 years, female 12.7
GTEX-13NZB-0626-SM-5IFH6 30-39 years, male 12.6
GTEX-13N2G-0926-SM-5IFGJ 60-69 years, male 12.4
GTEX-P78B-1326-SM-3P611 40-49 years, female 12.4
GTEX-ZAB5-0426-SM-5CVMI 50-59 years, male 12.3
GTEX-139TU-0826-SM-5IJFG 60-69 years, male 12.2
GTEX-Q2AG-1126-SM-48U1P 40-49 years, female 12.1
GTEX-Y5LM-0426-SM-4VBRO 40-49 years, female 12.1
GTEX-14DAQ-1726-SM-5S2R2 60-69 years, female 12.0
GTEX-RTLS-1326-SM-46MUN 60-69 years, female 11.4
GTEX-ZF29-2026-SM-4WWB7 60-69 years, female 11.2
GTEX-PX3G-0826-SM-48TZS 20-29 years, female 11.0
GTEX-12696-0826-SM-5EGGE 60-69 years, male 10.8
GTEX-1399R-1226-SM-5P9GF 30-39 years, male 10.7
GTEX-12KS4-1326-SM-5LUB3 30-39 years, male 10.4
GTEX-ZVP2-0626-SM-51MSO 50-59 years, male 10.4
GTEX-X4EO-1126-SM-4QARQ 60-69 years, female 9.8
GTEX-1497J-0726-SM-5Q5D1 60-69 years, male 9.6
GTEX-14A5I-1726-SM-5QGQ5 50-59 years, female 9.5
GTEX-12WSM-0726-SM-5GCOW 60-69 years, male 9.4
GTEX-X261-1726-SM-4PQYT 50-59 years, male 9.3
GTEX-OOBJ-0826-SM-3NB2K 60-69 years, male 9.2
GTEX-ZF2S-3026-SM-4WWCH 50-59 years, female 9.1
GTEX-QEL4-1226-SM-447A4 50-59 years, male 9.0
GTEX-S4Z8-0526-SM-4AD4T 60-69 years, male 8.8
GTEX-UPK5-1426-SM-4JBHH 40-49 years, male 8.6
GTEX-WFON-1726-SM-4LVMQ 40-49 years, male 8.3
GTEX-TKQ2-1726-SM-4DXUP 50-59 years, male 8.0
GTEX-XOTO-0826-SM-4B65O 50-59 years, male 7.9
GTEX-ZZPU-0426-SM-5GZYH 50-59 years, female 7.9
GTEX-139TS-1426-SM-5IFJD 60-69 years, male 7.8
GTEX-ZYY3-0626-SM-5NQ6W 60-69 years, female 7.7
GTEX-UTHO-2426-SM-4JBHD 60-69 years, male 7.6
GTEX-QV44-0326-SM-4R1KD 50-59 years, male 7.3
GTEX-132NY-0926-SM-5P9G3 60-69 years, male 7.0
GTEX-RWSA-1426-SM-47JXA 40-49 years, male 7.0
GTEX-WYVS-1926-SM-4PQZ2 40-49 years, female 6.8
GTEX-146FH-1526-SM-5NQBU 50-59 years, female 6.6
GTEX-YB5E-0326-SM-5IFHU 40-49 years, male 6.6
GTEX-13QJC-0726-SM-5RQJK 60-69 years, female 6.3
GTEX-ZPU1-0826-SM-57WG2 40-49 years, male 6.2
GTEX-YFC4-1526-SM-5IFJS 40-49 years, female 6.1
GTEX-13N11-0926-SM-5IJG2 50-59 years, female 6.0
GTEX-R53T-0326-SM-48FEC 50-59 years, female 5.7
GTEX-13NZ9-1326-SM-5MR3V 50-59 years, male 5.6
GTEX-14E1K-0326-SM-5S2PE 50-59 years, male 5.6
GTEX-X4EP-1026-SM-4QAS5 60-69 years, female 5.1
GTEX-REY6-1226-SM-48FDR 60-69 years, male 5.0
GTEX-1269C-0626-SM-5FQSS 60-69 years, female 4.2
GTEX-YEC4-0826-SM-5P9FV 40-49 years, male 4.1
GTEX-WQUQ-1926-SM-4OOSA 60-69 years, male 4.0
GTEX-145MO-2326-SM-5NQ9K 60-69 years, male 3.7
GTEX-14753-1626-SM-5NQ9L 60-69 years, male 3.7
GTEX-12WSG-0626-SM-5FQTQ 50-59 years, female 3.6
GTEX-RU72-1426-SM-46MUF 50-59 years, female 3.5
GTEX-X3Y1-2726-SM-4PQZH 40-49 years, male 3.5
GTEX-12WSL-0226-SM-5CVMJ 50-59 years, male 3.4
GTEX-U3ZN-0226-SM-3DB8D 30-39 years, female 3.4
GTEX-Z9EW-0426-SM-5CVM9 40-49 years, male 3.3
GTEX-13PVR-0126-SM-5S2PY 60-69 years, female 3.1
GTEX-RM2N-1926-SM-48FCU 50-59 years, male 2.8
GTEX-13O3O-1826-SM-5IFGW 60-69 years, female 2.7
GTEX-ZTPG-1426-SM-51MT3 20-29 years, female 2.6
GTEX-QDVN-0826-SM-48TZ2 50-59 years, male 2.4
GTEX-139YR-0226-SM-5IFEM 50-59 years, male 2.3
GTEX-VUSG-0126-SM-4KL1X 50-59 years, male 2.2
GTEX-131XE-0326-SM-5LZVO 50-59 years, male 1.3
GTEX-144GM-1326-SM-5LU5E 20-29 years, male 1.2
GTEX-X4XY-1626-SM-46MVN 60-69 years, male 1.1
GTEX-S32W-1926-SM-4AD63 50-59 years, female 1.0
GTEX-14C38-1526-SM-5RQJ7 50-59 years, male 0.3
Show all

LIVER - FANTOM5 CAGE

Average Tags Per Million

7.1

FANTOM5 sample id

Sample description

Tags Per Million

Liver
Tags Per Million: 7.1
FF:10018-101C9 64,69,70 years, mixed 7.1

Contact

  • BLOG
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS
  • DOWNLOADABLE DATA

The Human Protein Atlas

  • ANTIBODY AVAILABILITY
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.