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RASGEF1C

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:0.4TPM
GTEx:1.2RPKM
FANTOM5:0.8Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Low
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA028242

  

Endothelial cells

 Medium  

Glandular cells

 Low  

Peripheral nerve/ganglion

 High  
 
 

COLON - HPA RNA-seq

Average TPM

0.4
overview Male, age 54 Sample 1
TPM: 0.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0.5
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0.3
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.4
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.6
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

1.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 1.9
Samples: 149

Max RPKM: 9.6
Min RPKM: 0.2
Std RPKM: 1.6
Median RPKM: 1.3
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 9.6
GTEX-145LS-2926-SM-5O99G 60-69 years, female 7.8
GTEX-ZVZQ-2626-SM-59HLB 60-69 years, female 7.1
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 6.6
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 6.1
GTEX-13PVQ-2726-SM-5L3H7 50-59 years, male 6.0
GTEX-132NY-2726-SM-5PNY2 60-69 years, male 5.5
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 5.3
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 5.2
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 5.0
Show all
Colon - Transverse
RPKM: 0.7
Samples: 196

Max RPKM: 7.3
Min RPKM: 0.0
Std RPKM: 0.9
Median RPKM: 0.4
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 7.3
GTEX-111VG-2226-SM-5N9DU 60-69 years, male 5.5
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 4.1
GTEX-145LS-2726-SM-5Q5D8 60-69 years, female 3.8
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 3.7
GTEX-11O72-2226-SM-5PNW2 40-49 years, male 3.6
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 3.5
GTEX-Z93S-2426-SM-5HL8N 50-59 years, male 3.5
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 3.2
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 3.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

0.8

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 0.8
FF:10014-101C5 62,83,84 years, mixed 0.8

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.