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MDH2
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ANTIBODY INFORMATION VALIDATION SUMMARY IMMUNOCYTOCHEMISTRY IMMUNOHISTOCHEMISTRY WESTERN BLOT PROTEIN ARRAY ANTIGEN INFORMATION RELEVANT PUBLICATIONS

ANTIBODY INFORMATION

 
 

Antibody HPA019714

 

Antibody HPA019716

 

Antibody HPA019848

 

Antibody HPA026720

 

Provider

Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
  Atlas Antibodies
Sigma-Aldrich
 

Product name

HPA019714   HPA019716   HPA019848   HPA026720  

Host species

Rabbit   Rabbit   Rabbit   Rabbit  

Clonality

pAb   pAb   pAb   pAb  

Purity

Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand   Affinity purified using the PrEST-antigen as affinity ligand  

Other gene match

       

Released in version

5   5   5   5  

References

2        

Proper citation

Atlas Antibodies Cat#HPA019714, RRID:AB_1853678   Atlas Antibodies Cat#HPA019716, RRID:AB_1853680   Atlas Antibodies Cat#HPA019848, RRID:AB_1853683   Atlas Antibodies Cat#HPA026720, RRID:AB_1853685  

VALIDATION SUMMARY

 
 

Antibody HPA019714

 

Antibody HPA019716

 

Antibody HPA019848

 

Antibody HPA026720

 
Immunocytochemistry


Validated
 

Validated
   

Validated
 
Immunohistochemistry


Validated
 

Validated
 

Validated
 

Validated
 
Western blot

Supported   Supported   Supported   Supported  
Protein array

Supported   Supported   Supported   Approved  

IMMUNOCYTOCHEMISTRY

 
 

Antibody HPA019714

 

Antibody HPA019716

 

Antibody HPA019848

 

Antibody HPA026720

 

Formal validation: Independent

Validated

Antibody staining overlaps with antibody HPA026720.
Antibody staining overlaps with antibody HPA019716.
 
Validated

Antibody staining overlaps with antibody HPA026720.
Antibody staining overlaps with antibody HPA019714.
   
Validated

Antibody staining overlaps with antibody HPA019716.
Antibody staining overlaps with antibody HPA019714.
 
 

Standard validation

Supported   Supported     Supported  

       

Figure description

Immunofluorescent staining of human cell line U-2 OS shows localization to mitochondria.   Immunofluorescent staining of human cell line U-2 OS shows localization to mitochondria.     Immunofluorescent staining of human cell line U-251 MG shows localization to mitochondria.  

Antibody dilution

1:20   1:100     1:100  

Literature conformity

The subcellular location is supported by literature.   The subcellular location is supported by literature.     The subcellular location is supported by literature.  

IMMUNOHISTOCHEMISTRY

 
 

Antibody HPA019714

 

Antibody HPA019716

 

Antibody HPA019848

 

Antibody HPA026720

 

Formal validation: Independent

Validated

Pearson correlation >0.6 for protein expression in cell lines using independent antibodies.
 
Validated

Pearson correlation >0.6 for protein expression in cell lines using independent antibodies.
 
Validated

Pearson correlation >0.6 for protein expression in cell lines using independent antibodies.
 
Validated

Pearson correlation >0.6 for protein expression in cell lines using independent antibodies.
 

 
 
 
 

Figure description

Distribution of protein expression (antibody staining).
Pearson correlation with HPA026720 across 45 cell lines.
Pearson correlation with HPA019848 across 45 cell lines.
Pearson correlation with HPA019716 across 45 cell lines.
  Distribution of protein expression (antibody staining).
Pearson correlation with HPA026720 across 45 cell lines.
Pearson correlation with HPA019848 across 45 cell lines.
Pearson correlation with HPA019714 across 45 cell lines.
  Distribution of protein expression (antibody staining).
Pearson correlation with HPA026720 across 46 cell lines.
Pearson correlation with HPA019716 across 45 cell lines.
Pearson correlation with HPA019714 across 45 cell lines.
  Distribution of protein expression (antibody staining).
Pearson correlation with HPA019848 across 46 cell lines.
Pearson correlation with HPA019716 across 45 cell lines.
Pearson correlation with HPA019714 across 45 cell lines.
 
 

Formal validation: Independent

Validated

Spearman correlation >0.6 for protein expression in tissues using independent antibodies.
 
Validated

Spearman correlation >0.6 for protein expression in tissues using independent antibodies.
   
Validated

Spearman correlation >0.6 for protein expression in tissues using independent antibodies.
 

 
   
 

Figure description

Distribution of protein expression (antibody staining).
Spearman correlation with HPA026720 across 71 cell types.
Spearman correlation with HPA019716 across 70 cell types.
  Distribution of protein expression (antibody staining).
Spearman correlation with HPA026720 across 72 cell types.
Spearman correlation with HPA019714 across 70 cell types.
    Distribution of protein expression (antibody staining).
Spearman correlation with HPA019716 across 72 cell types.
Spearman correlation with HPA019714 across 71 cell types.
 
 

Standard validation

Supported   Supported   Supported   Supported  

       

Figure description

Immunohistochemical staining of human stomach shows strong cytoplasmic positivity in glandular cells.   Immunohistochemical staining of human stomach shows strong cytoplasmic positivity in glandular cells.   Immunohistochemical staining of human colon shows strong cytoplasmic positivity in granular pattern in glandular cells.   Immunohistochemical staining of human duodenum shows strong granular cytoplasmic positivity in glandular cells.  

Expression

RNA: detected in 37 tissues
Protein: detected in 74 cell types
  RNA: detected in 37 tissues
Protein: detected in 75 cell types
  RNA: detected in 37 tissues
Protein: detected in 79 cell types
  RNA: detected in 37 tissues
Protein: detected in 75 cell types
 

Retrieval

HIER pH6   HIER pH6   HIER pH6   HIER pH6  

Antibody dilution

1:300   1:750   1:1200   1:850  

Literature conformity

Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.   Consistent with extensive gene/protein characterization data.  

RNA consistency

Consistent with RNA expression data.   Consistent with RNA expression data.   Consistent with RNA expression data.   Consistent with RNA expression data.  

WESTERN BLOT

 
 

Antibody HPA019714

 

Antibody HPA019716

 

Antibody HPA019848

 

Antibody HPA026720

 

Standard validation

Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Supported

Analysis performed using a standard panel of samples.
Band of predicted size in kDa (+/-20%) with additional bands present.
  Supported

Analysis performed using a standard panel of samples.
Single band corresponding to the predicted size in kDa (+/-20%).
 

       

Figure description

Lane 1: Marker [kDa] 230, 130, 95, 72, 56, 36, 28, 17, 11
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 230, 130, 95, 72, 56, 36, 28, 17, 11
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 230, 130, 95, 72, 56, 36, 28, 17, 11
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
  Lane 1: Marker [kDa] 230, 130, 95, 72, 56, 36, 28, 17, 11
Lane 2: RT4
Lane 3: U-251 MG
Lane 4: Human Plasma
Lane 5: Liver
Lane 6: Tonsil
 

Target mass (kDa)

35.5, 30.9, 24.6   35.5   35.5, 30.9, 24.6   35.5, 30.9  

Antibody dilution

1:250   1:250   1:250   1:250  

PROTEIN ARRAY

 
 

Antibody HPA019714

 

Antibody HPA019716

 

Antibody HPA019848

 

Antibody HPA026720

 

Standard validation

Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Supported

Pass with single peak corresponding to interaction only with its own antigen.
  Approved

Pass with quality comment low specificity (binding to 1-2 PrESTs >15% and <40%).
 

       

Figure description

Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.   Antibody specificity analysis with protein arrays. Predicted and matching interactions are shown in green.  

Antibody dilution

1:3000   1:3000   1:3000   1:3000  

ANTIGEN INFORMATION

 
 

Antibody HPA019714

 

Antibody HPA019716

 

Antibody HPA019848

 

Antibody HPA026720

 

Antigen

Recombinant protein fragment   Recombinant protein fragment   Recombinant protein fragment   Recombinant protein fragment  

Length (aa)

83   81   77   84  

Antigen sequence

VTTLDIVRANTFVAELKGLDPARVNVPVIGGHAGKTIIPLISQCTPKVDF
PQDQLTALTGRIQEAGTEVVKAKAGAGSATLSM
 
LPDCLKGCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPEA
MICVIANPVNSTIPITAEVFKKHGVYNPNKI
 
LVDAMNGKEGVVECSFVKSQETECTYFSTPLLLGKKGIEKNLGIGKVSSF
EEKMISDAIPELKASIKKGEDFVKTLK
 
MLSALARPASAALRRSFSTSAQNNAKVAVLGASGGIGQPLSLLLKNSPLV
SRLTLYDIAHTPGVAADLSHIETKAAVKGYLGPE
 

Matching transcripts

MDH2-001 - ENSP00000327070 [100%]
MDH2-004 - ENSP00000416929 [100%]
MDH2-002 - ENSP00000408649 [80%]
  MDH2-001 - ENSP00000327070 [100%]
  MDH2-001 - ENSP00000327070 [100%]
MDH2-002 - ENSP00000408649 [100%]
MDH2-004 - ENSP00000416929 [100%]
  MDH2-001 - ENSP00000327070 [100%]
MDH2-002 - ENSP00000408649 [100%]
 

Other gene match

       
ANTIGEN VIEW
MDH2-001
MDH2-002
MDH2-004

RELEVANT PUBLICATIONS

 
 

Antibody HPA019714

 

Antibody HPA019716

 

Antibody HPA019848

 

Antibody HPA026720

 

1.

Molecular architecture of the chick vestibular hair bundle
Shin JB et al
Nat Neurosci 2013;16(3):365-74
       

2.

A mouse model of L-2-hydroxyglutaric aciduria, a disorder of metabolite repair
Rzem R et al
PLoS One 2015;10(3):e0119540
Application: WB
       
 

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