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TRIM4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:17.5TPM
GTEx:8.3RPKM
FANTOM5:39.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
 

Antibody staining

Antibody HPA019356

  

Antibody HPA029461

  

Endothelial cells

 Medium   Low  

Glandular cells

 High   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

17.5
overview Male, age 54 Sample 1
TPM: 11.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 25.7
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 18
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 16.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 15.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 14.9
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 20.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 20
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 18.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 16.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 19.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 17
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 12.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

8.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 8.5
Samples: 149

Max RPKM: 14.5
Min RPKM: 3.5
Std RPKM: 1.9
Median RPKM: 8.2
GTEX-148VJ-2426-SM-5NQ9Y 70-79 years, male 14.5
GTEX-11P81-1426-SM-5P9JN 30-39 years, female 14.3
GTEX-145ME-1126-SM-5SIAT 40-49 years, female 13.5
GTEX-11WQK-2526-SM-5CVL8 50-59 years, male 13.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 13.2
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 12.7
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 12.6
GTEX-Y9LG-1326-SM-4VBQB 30-39 years, male 12.1
GTEX-13X6K-2726-SM-5O9DG 60-69 years, female 11.9
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 11.8
Show all
Colon - Transverse
RPKM: 8.2
Samples: 196

Max RPKM: 14.2
Min RPKM: 2.1
Std RPKM: 1.9
Median RPKM: 8.0
GTEX-11P81-1126-SM-5GU5G 30-39 years, female 14.2
GTEX-11TTK-2426-SM-5PNYO 60-69 years, female 14.1
GTEX-11WQK-2126-SM-5EQME 50-59 years, male 14.1
GTEX-145ME-0826-SM-5O9AF 40-49 years, female 13.3
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 13.2
GTEX-13OVI-2026-SM-5J1MU 60-69 years, female 12.5
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 12.3
GTEX-S341-1426-SM-4AD6U 40-49 years, female 12.2
GTEX-X5EB-0926-SM-46MVT 40-49 years, male 12.2
GTEX-148VJ-2626-SM-5QGPI 70-79 years, male 11.8
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

39.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 39.0
FF:10014-101C5 62,83,84 years, mixed 39.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.