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TISSUE ATLAS PRIMARY DATA BREAST

GENE/PROTEIN

Antibody validation


Dictionary

Breast

BREAST - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:54.7TPM
GTEx:77.8RPKM
FANTOM5:71.3Tags Per Million

BREAST - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Glandular cells:Low
Myoepithelial cells:Low
 

Antibody staining

Antibody HPA030751

 

Antibody HPA030752

 

Antibody HPA030754

 

Antibody CAB034099

 

Adipocytes

Low   Not detected   Not detected   Not detected  

Glandular cells

Low   Low   Not detected   Medium  

Myoepithelial cells

Low   Not detected   Not detected   Medium  
       
       

BREAST - HPA RNA-seq

Average TPM

54.7

overview Female, age 52 Sample 1
TPM: 35.2
Cell types%
Glandular cells: 15
Adipocytes: 5
Other cell types: 80
overview Female, age 80 Sample 2
TPM: 57.7
Cell types%
Glandular cells: 5
Adipocytes: 15
Other cell types: 80
overview Female, age 47 Sample 3
TPM: 60.9
Cell types%
Glandular cells: 5
Adipocytes: 5
Other cell types: 90
overview Female, age 38 Sample 4
TPM: 64.9
Cell types%
Glandular cells: 40
Adipocytes: 5
Other cell types: 55

BREAST - GTEx RNA-seq

Average RPKM

77.8

GTEx sample id

Sample description

RPKM

Breast - Mammary Tissue
RPKM: 77.8
Samples: 214

Max RPKM: 186.5
Min RPKM: 20.1
Std RPKM: 28.7
Median RPKM: 71.7
GTEX-132Q8-1426-SM-5EGK7 60-69 years, male 186.5
GTEX-139T8-0826-SM-5L3DE 60-69 years, male 164.5
GTEX-WYVS-1726-SM-3NMAY 40-49 years, female 156.1
GTEX-12ZZX-1126-SM-5EGKB 40-49 years, female 146.4
GTEX-ZXES-0826-SM-5E43C 30-39 years, female 141.2
GTEX-U3ZN-1926-SM-4DXSG 30-39 years, female 139.3
GTEX-TML8-1226-SM-32QON 40-49 years, female 137.6
GTEX-YFC4-1426-SM-5IFJG 40-49 years, female 135.8
GTEX-13FTY-2226-SM-5J1ND 40-49 years, female 135.0
GTEX-XMD1-0826-SM-4AT52 60-69 years, male 131.0
GTEX-11EM3-1326-SM-5N9C6 20-29 years, female 128.9
GTEX-Q2AG-0326-SM-48U1O 40-49 years, female 126.1
GTEX-ZF2S-2026-SM-5E461 50-59 years, female 125.5
GTEX-RU72-0626-SM-46MUI 50-59 years, female 125.0
GTEX-XUZC-1626-SM-4BRVP 30-39 years, female 125.0
GTEX-SIU7-1626-SM-4BRUK 50-59 years, male 124.8
GTEX-1269C-2426-SM-5FQSN 60-69 years, female 122.1
GTEX-WYJK-1326-SM-3NB2T 50-59 years, male 122.0
GTEX-11P81-1926-SM-5BC53 30-39 years, female 118.6
GTEX-131YS-0626-SM-5EGKL 60-69 years, female 117.9
GTEX-ZC5H-2626-SM-5J2MG 40-49 years, female 117.4
GTEX-13PL6-2926-SM-5L3I2 40-49 years, female 116.3
GTEX-R55F-1726-SM-2TF4R 50-59 years, male 116.2
GTEX-R3RS-0626-SM-48FE1 40-49 years, female 115.2
GTEX-U3ZH-1426-SM-4DXSR 30-39 years, male 115.2
GTEX-ZF29-1926-SM-5S2P1 60-69 years, female 112.7
GTEX-13O3P-0826-SM-5L3DH 50-59 years, male 112.5
GTEX-WRHU-0326-SM-3MJFY 50-59 years, female 112.5
GTEX-X15G-1626-SM-3NMB3 50-59 years, female 112.3
GTEX-WYBS-0926-SM-3NM94 60-69 years, female 111.8
GTEX-QDT8-0626-SM-48TYW 30-39 years, female 111.5
GTEX-X4EP-2926-SM-3P5YQ 60-69 years, female 110.8
GTEX-145MN-1926-SM-5SIAI 30-39 years, male 110.5
GTEX-W5X1-2326-SM-3GIL6 40-49 years, female 109.9
GTEX-13OW5-2226-SM-5L3HC 60-69 years, male 109.8
GTEX-11EMC-2026-SM-5A5JV 60-69 years, female 109.4
GTEX-13N11-1726-SM-5J1OJ 50-59 years, female 107.2
GTEX-T5JC-2126-SM-32PMO 20-29 years, male 106.5
GTEX-T2YK-2226-SM-32QPT 50-59 years, male 106.3
GTEX-11PRG-0826-SM-5EQ6A 50-59 years, male 105.9
GTEX-131XW-0726-SM-5EGK3 50-59 years, female 105.9
GTEX-111YS-1926-SM-5GICC 60-69 years, male 105.4
GTEX-RWS6-1926-SM-47JXY 60-69 years, female 103.2
GTEX-S341-1526-SM-4AD6K 40-49 years, female 103.2
GTEX-11LCK-2426-SM-5HL5F 30-39 years, male 103.0
GTEX-TMMY-0726-SM-33HBE 40-49 years, female 102.3
GTEX-T6MO-0326-SM-32QOK 40-49 years, female 101.7
GTEX-XOT4-0726-SM-4GIAW 60-69 years, female 101.3
GTEX-U412-1826-SM-4DXTJ 60-69 years, male 100.3
GTEX-ZVE2-1226-SM-5NQ8R 50-59 years, male 99.9
GTEX-Y3IK-2326-SM-4WWDT 50-59 years, female 98.7
GTEX-QEL4-2126-SM-447AE 50-59 years, male 97.5
GTEX-ZAJG-0626-SM-5HL8X 50-59 years, female 97.5
GTEX-S4P3-1326-SM-4AD6V 50-59 years, female 96.4
GTEX-Y8LW-1626-SM-5IFHX 50-59 years, female 95.6
GTEX-ZLV1-1426-SM-4WWES 60-69 years, female 95.5
GTEX-T2IS-1526-SM-32QPR 20-29 years, female 94.9
GTEX-132NY-0826-SM-5K7Y7 60-69 years, male 94.5
GTEX-11GS4-2126-SM-5A5KR 60-69 years, male 93.2
GTEX-13QIC-2326-SM-5LU5N 60-69 years, female 92.9
GTEX-13NZ8-0126-SM-5IJCT 60-69 years, female 91.9
GTEX-T5JW-2026-SM-4DM63 20-29 years, female 91.6
GTEX-UJHI-1426-SM-3DB9C 50-59 years, female 91.0
GTEX-11DXW-0626-SM-5N9ER 40-49 years, male 90.9
GTEX-T6MN-0726-SM-32PML 50-59 years, male 90.3
GTEX-UPK5-2326-SM-3P5Z8 40-49 years, male 89.8
GTEX-ZV7C-1826-SM-5NQ83 50-59 years, male 88.8
GTEX-QEG5-0726-SM-4R1JQ 20-29 years, male 88.2
GTEX-13W3W-1226-SM-5LU4H 60-69 years, female 88.0
GTEX-XUJ4-1926-SM-4BOOV 60-69 years, female 86.0
GTEX-11EI6-0626-SM-5985T 60-69 years, male 85.9
GTEX-WXYG-2226-SM-4E3IM 50-59 years, female 85.5
GTEX-S4UY-0726-SM-4AD6X 40-49 years, female 85.2
GTEX-VJWN-0726-SM-3GIJ8 50-59 years, female 85.2
GTEX-11NSD-0926-SM-5N9DR 20-29 years, male 84.9
GTEX-Y111-2026-SM-4SOJA 50-59 years, male 84.8
GTEX-XUW1-2326-SM-4BOO5 50-59 years, female 84.5
GTEX-ZTX8-1226-SM-4YCE9 20-29 years, male 84.3
GTEX-Y5LM-1726-SM-4VDSX 40-49 years, female 84.2
GTEX-1117F-2826-SM-5GZXL 60-69 years, female 83.8
GTEX-146FH-0826-SM-5SI8T 50-59 years, female 83.8
GTEX-1122O-1226-SM-5H113 60-69 years, female 83.7
GTEX-Y5V5-2126-SM-4WWFO 60-69 years, female 83.7
GTEX-133LE-1726-SM-5K7VQ 20-29 years, female 82.9
GTEX-ZDTT-2126-SM-5S2OJ 60-69 years, male 82.4
GTEX-ZZPU-0626-SM-5E43T 50-59 years, female 82.4
GTEX-ZVTK-0326-SM-51MRR 20-29 years, male 81.6
GTEX-ZA64-1526-SM-5CVMD 20-29 years, male 80.9
GTEX-132AR-0826-SM-5EGK6 50-59 years, female 80.6
GTEX-13113-1726-SM-5GCOO 60-69 years, female 80.5
GTEX-147F4-2826-SM-5NQBN 50-59 years, male 79.7
GTEX-12WSB-0626-SM-59HJO 60-69 years, female 79.6
GTEX-139TU-0626-SM-5KM3X 60-69 years, male 78.7
GTEX-ZEX8-2226-SM-57WC6 50-59 years, male 78.7
GTEX-WI4N-1426-SM-3LK7H 40-49 years, female 78.4
GTEX-ZF3C-2326-SM-5S2MZ 50-59 years, female 78.2
GTEX-1192X-2326-SM-5987X 50-59 years, male 77.6
GTEX-ZYT6-0126-SM-5E45J 30-39 years, male 76.8
GTEX-11P7K-0726-SM-5EGKX 30-39 years, male 76.7
GTEX-WY7C-2726-SM-3NB3P 50-59 years, male 76.0
GTEX-XMD2-0926-SM-4WWEF 60-69 years, female 75.9
GTEX-13CF2-2026-SM-5K7VI 60-69 years, male 75.8
GTEX-XBED-1626-SM-47JYN 60-69 years, male 74.9
GTEX-Y3I4-1526-SM-4TT7K 50-59 years, male 74.5
GTEX-139T6-1626-SM-5PNYZ 50-59 years, male 73.8
GTEX-144GL-2026-SM-5LU3O 50-59 years, male 73.5
GTEX-11ONC-2126-SM-5HL6E 60-69 years, male 71.7
GTEX-12KS4-0126-SM-5Q5A5 30-39 years, male 71.7
GTEX-VUSG-2226-SM-4KKZO 50-59 years, male 71.7
GTEX-11EQ9-1826-SM-5Q5AJ 30-39 years, male 71.3
GTEX-14753-2426-SM-5LU8U 60-69 years, male 71.2
GTEX-ZTTD-1026-SM-51MRD 50-59 years, male 70.7
GTEX-UTHO-1026-SM-3GAF7 60-69 years, male 70.0
GTEX-R53T-1526-SM-48FEK 50-59 years, female 69.7
GTEX-XMK1-1126-SM-4IHJ8 40-49 years, male 69.6
GTEX-X4XY-0926-SM-4E3JD 60-69 years, male 69.3
GTEX-1313W-0826-SM-5EQ4T 50-59 years, female 68.7
GTEX-ZYW4-0826-SM-5GIDG 60-69 years, male 67.9
GTEX-11DXZ-1926-SM-5GZZL 50-59 years, male 67.3
GTEX-ZDXO-0126-SM-5S2ND 60-69 years, male 66.9
GTEX-1314G-1226-SM-5BC6D 30-39 years, male 66.6
GTEX-13NZ9-1026-SM-5MR5K 50-59 years, male 66.4
GTEX-11GSO-1926-SM-5A5K3 60-69 years, male 65.9
GTEX-13O61-1826-SM-5KM4I 60-69 years, male 65.9
GTEX-YFCO-1826-SM-4W1YH 40-49 years, male 65.6
GTEX-11NV4-2026-SM-5N9DG 60-69 years, male 65.3
GTEX-13FHO-0826-SM-5L3E8 60-69 years, male 65.3
GTEX-YJ8O-2226-SM-5IFHW 40-49 years, female 65.3
GTEX-ZPIC-1126-SM-5BC7F 40-49 years, female 65.3
GTEX-1211K-1926-SM-5EQLB 60-69 years, female 64.7
GTEX-ZU9S-1926-SM-5NQBP 30-39 years, male 64.6
GTEX-13W46-0826-SM-5LU3H 50-59 years, male 64.5
GTEX-117YX-1426-SM-5H12H 50-59 years, male 63.8
GTEX-QVJO-1826-SM-447C9 60-69 years, female 63.8
GTEX-ZV6S-1826-SM-5NQ8D 40-49 years, female 63.8
GTEX-11ZUS-0826-SM-5FQUY 30-39 years, male 63.4
GTEX-ZUA1-1526-SM-59HLS 40-49 years, male 62.9
GTEX-S4Q7-1126-SM-4AD6R 20-29 years, male 62.8
GTEX-Y114-2026-SM-4TT7L 50-59 years, female 62.3
GTEX-13OW8-0226-SM-5K7UP 60-69 years, male 61.9
GTEX-WFON-1826-SM-3GILG 40-49 years, male 61.8
GTEX-ZYFC-0826-SM-5E44K 50-59 years, male 61.4
GTEX-XQ3S-1326-SM-4BOPQ 20-29 years, male 61.0
GTEX-X261-0626-SM-3NMD9 50-59 years, male 60.9
GTEX-ZY6K-1626-SM-5GZWV 50-59 years, male 60.7
GTEX-QMRM-1626-SM-4R1KV 50-59 years, male 60.6
GTEX-13N1W-0626-SM-5MR4U 70-79 years, male 60.5
GTEX-11I78-2226-SM-5PNYA 50-59 years, female 60.2
GTEX-13NZB-2126-SM-5MR4Y 30-39 years, male 60.2
GTEX-13D11-1026-SM-5IJFB 50-59 years, female 59.6
GTEX-SE5C-2126-SM-4BRUJ 40-49 years, female 59.5
GTEX-S7SE-0826-SM-4AT4D 50-59 years, male 59.4
GTEX-XYKS-1326-SM-4BRUN 60-69 years, female 59.2
GTEX-S32W-2026-SM-4AD6E 50-59 years, female 59.0
GTEX-1399U-1826-SM-5PNZ1 50-59 years, female 58.4
GTEX-13PVQ-1026-SM-5KM3M 50-59 years, male 58.4
GTEX-13FTW-1426-SM-5LZWZ 40-49 years, male 58.3
GTEX-11O72-2126-SM-5N9FO 40-49 years, male 57.9
GTEX-13O3O-0826-SM-5K7WE 60-69 years, female 57.9
GTEX-WOFL-0826-SM-3MJG1 60-69 years, male 57.9
GTEX-XQ8I-2426-SM-4WAXY 50-59 years, male 56.9
GTEX-145ME-1526-SM-5Q5F2 40-49 years, female 56.7
GTEX-11WQC-1726-SM-5GU4W 60-69 years, male 56.3
GTEX-S33H-0326-SM-4AD6N 30-39 years, male 56.3
GTEX-12BJ1-1826-SM-5HL9N 60-69 years, male 56.2
GTEX-XGQ4-0926-SM-4AT4U 50-59 years, male 55.8
GTEX-ZVZQ-0826-SM-51MRF 60-69 years, female 54.9
GTEX-12WSK-2226-SM-5GCO5 40-49 years, female 54.4
GTEX-YB5E-1726-SM-5IFJ3 40-49 years, male 53.8
GTEX-ZAB4-2526-SM-5HL8M 40-49 years, male 53.7
GTEX-ZVT4-1026-SM-57WC4 50-59 years, female 53.4
GTEX-R55D-0826-SM-48FEA 50-59 years, male 53.3
GTEX-PSDG-1626-SM-48TCQ 50-59 years, male 52.8
GTEX-ZWKS-2826-SM-5NQ74 30-39 years, male 52.5
GTEX-13O3Q-2226-SM-5KM4O 50-59 years, male 51.9
GTEX-TKQ2-1826-SM-33HB2 50-59 years, male 51.6
GTEX-11WQK-2426-SM-5GU5C 50-59 years, male 51.2
GTEX-Y5V6-2126-SM-4WWFX 60-69 years, male 51.1
GTEX-11DXY-2326-SM-5GICW 60-69 years, male 50.7
GTEX-Y9LG-1426-SM-5IFJZ 30-39 years, male 49.9
GTEX-12WSM-1726-SM-5BC6J 60-69 years, male 49.7
GTEX-117XS-1926-SM-5GICO 60-69 years, male 49.4
GTEX-11OF3-1926-SM-59889 60-69 years, male 49.4
GTEX-ZQUD-1926-SM-51MSA 30-39 years, male 49.4
GTEX-ZVT2-1826-SM-5NQ8W 50-59 years, female 49.4
GTEX-14E6E-1326-SM-5S2NR 30-39 years, male 49.1
GTEX-TKQ1-0226-SM-33HB5 30-39 years, male 49.1
GTEX-ZYWO-2326-SM-5GZY4 40-49 years, female 48.9
GTEX-11ZTT-2326-SM-5EQLG 60-69 years, female 48.0
GTEX-XV7Q-2326-SM-4BRVZ 40-49 years, female 47.5
GTEX-REY6-2426-SM-48FF5 60-69 years, male 45.5
GTEX-12WSN-1326-SM-5GCNT 40-49 years, male 44.7
GTEX-14AS3-1626-SM-5S2OY 40-49 years, female 44.4
GTEX-YB5K-1626-SM-5IFIN 40-49 years, female 44.4
GTEX-13FTX-1126-SM-5N9EN 20-29 years, female 44.3
GTEX-RUSQ-2026-SM-4GIAK 50-59 years, male 42.7
GTEX-145MO-0826-SM-5NQBL 60-69 years, male 41.4
GTEX-11DZ1-0326-SM-5N9BN 50-59 years, male 41.1
GTEX-145LT-0726-SM-5S2VM 40-49 years, male 41.1
GTEX-ZT9W-2026-SM-51MRA 50-59 years, male 41.1
GTEX-ZQG8-0726-SM-5P9H9 60-69 years, female 41.0
GTEX-ZZ64-1226-SM-5E43R 20-29 years, male 41.0
GTEX-144GM-0926-SM-5O994 20-29 years, male 40.0
GTEX-ZDYS-1126-SM-5K7UB 50-59 years, male 38.9
GTEX-U8XE-0826-SM-4E3J1 30-39 years, male 38.8
GTEX-Y8E4-1626-SM-5S2MW 40-49 years, male 36.8
GTEX-YEC3-1026-SM-5IFI5 50-59 years, male 36.5
GTEX-13CF3-2126-SM-5IFJP 60-69 years, female 36.0
GTEX-11TUW-1826-SM-5BC5D 60-69 years, male 33.5
GTEX-ZLFU-2126-SM-4WWEV 40-49 years, male 31.7
GTEX-11P82-1326-SM-5HL62 20-29 years, male 30.2
GTEX-13S86-1226-SM-5S2OA 40-49 years, male 29.7
GTEX-14ABY-2126-SM-5QGQZ 50-59 years, male 21.2
GTEX-11TT1-2126-SM-5GU5Y 20-29 years, male 20.1
Show all

BREAST - FANTOM5 CAGE

Average Tags Per Million

71.3

FANTOM5 sample id

Sample description

Tags Per Million

Breast
Tags Per Million: 71.3
FF:10080-102A8 77 years, female 71.3

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