Fields »
ABOUT
HELP
BLOG
DOCK11

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:5.4TPM
GTEx:6.3RPKM
FANTOM5:24.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
 

Antibody staining

Antibody HPA059695

  

Endothelial cells

 Not detected  

Glandular cells

 Not detected  
 

COLON - HPA RNA-seq

Average TPM

5.4
overview Male, age 54 Sample 1
TPM: 3.7
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 5.2
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.8
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 4.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 8.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 7.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.5
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 8.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.6
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 6.9
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 5.3
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

6.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 8.3
Samples: 149

Max RPKM: 14.2
Min RPKM: 3.1
Std RPKM: 2.1
Median RPKM: 8.1
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 14.2
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 13.7
GTEX-ZAB5-1426-SM-5HL9D 50-59 years, male 13.2
GTEX-11ZU8-1126-SM-5EQ5K 60-69 years, male 12.9
GTEX-ZV6S-1126-SM-57WE9 40-49 years, female 12.7
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 12.6
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 12.5
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 12.4
GTEX-13VXT-2026-SM-5L3EW 20-29 years, female 12.3
GTEX-11DXX-1926-SM-5EGJK 60-69 years, female 11.7
Show all
Colon - Transverse
RPKM: 4.8
Samples: 196

Max RPKM: 27.1
Min RPKM: 0.6
Std RPKM: 3.5
Median RPKM: 3.8
GTEX-14AS3-1126-SM-5Q5CR 40-49 years, female 27.1
GTEX-ZV6S-1226-SM-59HLH 40-49 years, female 15.3
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 14.1
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 12.1
GTEX-12WSL-1626-SM-5GCMU 50-59 years, male 12.0
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 12.0
GTEX-117YX-0826-SM-5H11J 50-59 years, male 11.6
GTEX-S341-1426-SM-4AD6U 40-49 years, female 11.5
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 11.1
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 11.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

24.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 24.9
FF:10014-101C5 62,83,84 years, mixed 24.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.