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COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:0.1TPM
GTEx:0.2RPKM
FANTOM5:0.0Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Not detected
 

Antibody staining

Antibody HPA023644

  

Antibody HPA027318

  

Antibody CAB032598

  

Endothelial cells

 Low   Low   Medium  

Glandular cells

 Low   Not detected   Not detected  
     
     
     

COLON - HPA RNA-seq

Average TPM

0.1
overview Male, age 54 Sample 1
TPM: 0
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 0
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 0.1
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 0.2
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 0
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 0.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 0.7
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 0
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 0.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 0
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 0
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 0.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 0.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.2
Samples: 149

Max RPKM: 2.4
Min RPKM: 0.0
Std RPKM: 0.3
Median RPKM: 0.2
GTEX-WHPG-1626-SM-4M1ZL 50-59 years, male 2.4
GTEX-ZYY3-2226-SM-5E45A 60-69 years, female 2.1
GTEX-WQUQ-2626-SM-4MVNP 60-69 years, male 1.4
GTEX-V955-1726-SM-4JBHF 60-69 years, male 1.1
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 0.7
GTEX-ZY6K-1326-SM-5GZWP 50-59 years, male 0.6
GTEX-11PRG-2026-SM-5GU5F 50-59 years, male 0.5
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 0.5
GTEX-12ZZW-2426-SM-5DUWE 50-59 years, male 0.5
GTEX-13111-1926-SM-5GCOL 50-59 years, male 0.5
Show all
Colon - Transverse
RPKM: 0.3
Samples: 196

Max RPKM: 2.0
Min RPKM: 0.0
Std RPKM: 0.3
Median RPKM: 0.2
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 2.0
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 1.6
GTEX-V955-1626-SM-4JBHJ 60-69 years, male 1.3
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 1.2
GTEX-W5WG-2426-SM-4LMI6 50-59 years, female 1.2
GTEX-13PL7-2526-SM-5IFGR 60-69 years, female 1.1
GTEX-QLQ7-1126-SM-4R1KN 60-69 years, male 1.0
GTEX-11P7K-1526-SM-5EGI7 30-39 years, male 0.9
GTEX-Q734-1126-SM-48TZY 40-49 years, female 0.9
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 0.9
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

0.0

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 0.0
FF:10014-101C5 62,83,84 years, mixed 0.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.