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COMMD3

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:27.5TPM
GTEx:22.1RPKM
FANTOM5:66.7Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA036584

  

Endothelial cells

 Medium  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

27.5
overview Male, age 54 Sample 1
TPM: 27
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 18.9
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 20
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 23.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 18.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 41.1
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 32.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 25.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 31
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 32.8
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 28.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 35
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 22.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

22.1

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 23.6
Samples: 149

Max RPKM: 38.7
Min RPKM: 12.4
Std RPKM: 4.7
Median RPKM: 23.2
GTEX-1477Z-2126-SM-5Q5CM 60-69 years, male 38.7
GTEX-13CF2-1826-SM-5N9GK 60-69 years, male 36.0
GTEX-ZE7O-2626-SM-51MSS 50-59 years, female 35.0
GTEX-12ZZX-2726-SM-5N9FT 40-49 years, female 32.6
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 32.5
GTEX-11EMC-1426-SM-5N9E4 60-69 years, female 32.3
GTEX-ZVT3-2826-SM-5GU6A 60-69 years, female 31.8
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 31.3
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 31.1
GTEX-14A5I-2426-SM-5Q5CP 50-59 years, female 30.9
Show all
Colon - Transverse
RPKM: 20.9
Samples: 196

Max RPKM: 31.7
Min RPKM: 7.3
Std RPKM: 3.7
Median RPKM: 20.6
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 31.7
GTEX-13OW6-2126-SM-5N9GL 50-59 years, male 30.7
GTEX-147JS-2526-SM-5S2Q8 60-69 years, male 29.9
GTEX-13FHP-2426-SM-5KLZ5 50-59 years, male 29.6
GTEX-11ZVC-2126-SM-5EGJ1 50-59 years, female 29.5
GTEX-13U4I-2426-SM-5LU34 40-49 years, female 28.8
GTEX-ZYFC-2626-SM-5NQ6S 50-59 years, male 28.8
GTEX-147F3-1926-SM-5SIB9 50-59 years, female 28.7
GTEX-12ZZZ-2426-SM-5GCNN 60-69 years, male 28.2
GTEX-WQUQ-2526-SM-4MVNO 60-69 years, male 27.7
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

66.7

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 66.7
FF:10014-101C5 62,83,84 years, mixed 66.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.