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Gene name

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Chromosome

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In atlas

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Reliability

Reliability

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Validation

Method

Validation

Method

Validation

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Cancer

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Detectable

Cell line

Detectable

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ARFGAP2
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    TISSUE

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    CELL

  • PATHOLOGY

PATHOLOGY ATLAS

GENE/PROTEIN

Antibody validation

Dictionary

Level of antibody staining/expression





High
Medium
Low
Not detected

GENERAL INFORMATION

Gene name

ARFGAP2

Gene description

ADP-ribosylation factor GTPase activating protein 2

Protein class

Predicted intracellular proteins

Predicted localization

Intracellular

Number of transcripts

11
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA category

TCGA (cancer tissue):Expressed in all
HPA (cell line):Expressed in all
HPA (normal tissue):Expressed in all

Protein evidence

Evidence at protein level

Protein expression
normal tissue

Ubiquitous cytoplasmic expression

ANTIBODY IHC RELIABILITY

Data reliability
description

Antibody staining mainly consistent with RNA expression data.

Reliability score

Supported based on 2 antibodies.
HPA016649 , HPA018152
SHOW MORE

PROGNOSTIC SUMMARY

Prognostic marker in renal cancer (favourable).
Renal cancer p<0.001
Show all

RNA EXPRESSION OVERVIEW

TCGA dataset
RNA cancer category: Expressed in all

PROTEIN EXPRESSION

Colorectal cancer
Breast cancer
Prostate cancer
Lung cancer
Liver cancer

STAINING SUMMARY

HPA016649
HPA018152

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Malignant cells exhibited moderate or strong cytoplasmic staining. Most cases of hepatocellular carcinomas were negative.

Cancer

Cancer staining

Protein
expression of
normal tissue

Breast cancer
 
Carcinoid
 
Cervical cancer
 
 
Colorectal cancer
 
 
Endometrial cancer
 
 
Glioma
 
Head and neck cancer
 
 
Liver cancer
 
 
Lung cancer
 
 
Lymphoma
 
 
 

Cancer

Cancer staining

Protein
expression of
normal tissue

Melanoma
 
Ovarian cancer
 
Pancreatic cancer
 
Prostate cancer
 
Renal cancer
 
Skin cancer
 
Stomach cancer
 
 
Testis cancer
 
Thyroid cancer
 
Urothelial cancer
 

Staining summary

Moderate to strong cytoplasmic staining was observed in most malignancies. Several liver and renal cancers were weakly stained or negative.

GENE INFORMATION

Gene name

ARFGAP2 (HGNC Symbol)

Synonyms

FLJ14576, IRZ, Zfp289, ZNF289

Description

ADP-ribosylation factor GTPase activating protein 2 (HGNC Symbol)

Entrez gene summary

Chromosome

11

Cytoband

p11.2

Chromosome location (bp)

47164299 - 47177125

Protein evidence

Evidence at protein level (all genes)

Ensembl

ENSG00000149182 (version 83.38)

Entrez gene

84364

UniProt

Q8N6H7 (UniProt - Evidence at protein level)

neXtProt

NX_Q8N6H7

Antibodypedia

ARFGAP2 antibodies

PROTEIN BROWSER

«
ARFGAP2-001
ARFGAP2-002
ARFGAP2-015
ARFGAP2-017
ARFGAP2-021
ARFGAP2-023
ARFGAP2-026
ARFGAP2-027
ARFGAP2-201
ARFGAP2-202
ARFGAP2-203
»

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)

ARFGAP2-001
ENSP00000434442
ENST00000524782
Q8N6H7 [Direct mapping]
ADP-ribosylation factor GTPase-activating protein 2
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0000139 [Golgi membrane]
GO:0005096 [GTPase activator activity]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0015031 [protein transport]
GO:0016192 [vesicle-mediated transport]
GO:0043547 [positive regulation of GTPase activity]
GO:0046872 [metal ion binding]
Show all
521 aa
56.7 kDa
No 0
ARFGAP2-002
ENSP00000431684
ENST00000528444
E9PK28 [Direct mapping]
ADP-ribosylation factor GTPase-activating protein 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005096 [GTPase activator activity]
GO:0043547 [positive regulation of GTPase activity]
Show all
239 aa
26.1 kDa
No 0
ARFGAP2-015
ENSP00000434809
ENST00000525314
E9PN48 [Direct mapping]
ADP-ribosylation factor GTPase-activating protein 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005096 [GTPase activator activity]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0043547 [positive regulation of GTPase activity]
Show all
252 aa
27.1 kDa
No 0
ARFGAP2-017
ENSP00000434433
ENST00000527927
E9PQP3 [Direct mapping]
ADP-ribosylation factor GTPase-activating protein 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005096 [GTPase activator activity]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0043547 [positive regulation of GTPase activity]
Show all
274 aa
30.6 kDa
No 0
ARFGAP2-021
ENSP00000435488
ENST00000530596
E9PJT7 [Direct mapping]
ADP-ribosylation factor GTPase-activating protein 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005096 [GTPase activator activity]
GO:0043547 [positive regulation of GTPase activity]
Show all
173 aa
19.4 kDa
No 0
ARFGAP2-023
ENSP00000431939
ENST00000525398
E9PIY6 [Direct mapping]
ADP-ribosylation factor GTPase-activating protein 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005096 [GTPase activator activity]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0005886 [plasma membrane]
GO:0043547 [positive regulation of GTPase activity]
Show all
327 aa
36.1 kDa
No 0
ARFGAP2-026
ENSP00000437305
ENST00000526342
E9PMU9 [Direct mapping]
ADP-ribosylation factor GTPase-activating protein 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005096 [GTPase activator activity]
GO:0043547 [positive regulation of GTPase activity]
Show all
156 aa
17.4 kDa
No 0
ARFGAP2-027
ENSP00000434022
ENST00000527776
H0YDN9 [Direct mapping]
ADP-ribosylation factor GTPase-activating protein 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
237 aa
25.7 kDa
No 0
ARFGAP2-201
ENSP00000400226
ENST00000426335
G5E9L0 [Direct mapping]
ADP-ribosylation factor GTPase-activating protein 2
Show all
Predicted intracellular proteins
Protein evidence (Kim et al 2014)
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005096 [GTPase activator activity]
GO:0005730 [nucleolus]
GO:0005737 [cytoplasm]
GO:0005794 [Golgi apparatus]
GO:0043547 [positive regulation of GTPase activity]
Show all
493 aa
53.5 kDa
No 0
ARFGAP2-202
ENSP00000486339
ENST00000627920
A0A0D9SF70 [Direct mapping]
ADP-ribosylation factor GTPase-activating protein 2; Zinc finger protein 289, ID1 regulated, isoform CRA_d
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005096 [GTPase activator activity]
GO:0043547 [positive regulation of GTPase activity]
Show all
385 aa
42.2 kDa
No 0
ARFGAP2-203
ENSP00000486229
ENST00000629231
E9PM18 [Direct mapping]
ADP-ribosylation factor GTPase-activating protein 2
Show all
Predicted intracellular proteins
Protein evidence (Ezkurdia et al 2014)
Show all
GO:0005096 [GTPase activator activity]
GO:0043547 [positive regulation of GTPase activity]
Show all
70 aa
7.7 kDa
No 0

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The Human Protein Atlas project is funded
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