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LAMTOR1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:66.8TPM
GTEx:29.2RPKM
FANTOM5:114.2Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:High
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA002997

  

Endothelial cells

 Medium  

Glandular cells

 High  

Peripheral nerve/ganglion

 Medium  
 
 
 

COLON - HPA RNA-seq

Average TPM

66.8
overview Male, age 54 Sample 1
TPM: 71.3
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 51.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 46.4
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 69.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 52.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 84.5
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 65.6
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 74.4
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 65.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 64.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 78.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 85.4
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 59.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

29.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 27.9
Samples: 149

Max RPKM: 42.8
Min RPKM: 17.4
Std RPKM: 3.9
Median RPKM: 27.4
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 42.8
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 39.7
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 38.4
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 35.9
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 35.5
GTEX-13PL7-2426-SM-5J2N3 60-69 years, female 34.4
GTEX-1339X-1726-SM-5P9J9 40-49 years, male 34.2
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 34.1
GTEX-11EI6-2626-SM-5PNVT 60-69 years, male 34.0
GTEX-146FH-2426-SM-5Q5EW 50-59 years, female 34.0
Show all
Colon - Transverse
RPKM: 30.1
Samples: 196

Max RPKM: 50.0
Min RPKM: 10.3
Std RPKM: 5.2
Median RPKM: 30.1
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 50.0
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 45.8
GTEX-Y3IK-1826-SM-4WWDS 50-59 years, female 40.3
GTEX-ZXES-1626-SM-5NQ7L 30-39 years, female 40.2
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 40.1
GTEX-1339X-1626-SM-5IJDN 40-49 years, male 39.7
GTEX-TML8-1326-SM-4DXTO 40-49 years, female 39.7
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 39.4
GTEX-WOFM-2026-SM-4OOSQ 20-29 years, male 39.1
GTEX-O5YT-1426-SM-3MJHC 20-29 years, male 39.0
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

114.2

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 114.2
FF:10014-101C5 62,83,84 years, mixed 114.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.