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Field

Term
Gene name

Class

Subclass

Chromosome

External id

In atlas

Reliability

Reliability

Reliability

Validation

Method

Validation

Method

Validation

Method

Validation

Location

Searches

Tissue

Cell type

Expression

Tissue

Specificity

Cell line

Specificity

Cancer

Specificity

Tissue

Detectable

Cell line

Detectable

Cancer

Detectable

Cancer

Prognosis

Category

Score

Score

Score

Antibodies

Column

 
 
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PATHOLOGY ATLAS MELANOMA

GENE/PROTEIN

Antibody validation

Dictionary

Melanoma

MELANOMA - Survival analysis

Best separation

Median separation

Expression cutoff

232.9 FPKM 272.4 FPKM

3-year survival high

44% 56%

3-year survival low

29% 28%

Log-rank P value

1.68e-1 8.11e-1

Interactive survival scatter plot (individual patient data)




Stage:



TCGA RNA samples

Average FPKM

303.8

Number of samples

102

Samples

Sample

Description

FPKM

TCGA-EB-A97M-01A 66 years, male, white, stage:iic 968.7
TCGA-EB-A5SF-01A 78 years, female, white, stage:iic 700.6
TCGA-BF-A3DL-01A 84 years, female, white, stage:iiib 663.0
TCGA-BF-A5EO-01A 65 years, male, white, stage:iic 656.8
TCGA-EB-A3Y7-01A 86 years, female, white, stage:iiib 642.3
TCGA-IH-A3EA-01A 61 years, male, white, stage:iic 642.1
TCGA-BF-AAP4-01A 61 years, male, white, stage:iic 563.1
TCGA-BF-AAOX-01A 83 years, male, white, stage:iic 519.0
TCGA-EB-A85I-01A 66 years, male, white, stage:iic 516.0
TCGA-XV-AAZY-01A 76 years, female, white, stage:iiic 494.3
TCGA-BF-A5ER-01A 63 years, male, white, stage:iic 481.1
TCGA-BF-A3DM-01A 63 years, male, white, stage:iia 480.1
TCGA-BF-A5EP-01A 75 years, female, white, stage:iiic 436.3
TCGA-WE-A8K4-01A 85 years, male, white, stage:iib 430.8
TCGA-BF-A1PZ-01A 71 years, female, white, stage:iib 429.6
TCGA-EB-A3HV-01A 37 years, male, white, stage:iic 410.6
TCGA-FR-A2OS-01A 49 years, female, white, stage:iic 404.6
TCGA-ER-A194-01A 77 years, male, white 403.8
TCGA-EB-A431-01A 34 years, male, white, stage:iic 400.6
TCGA-EB-A42Y-01A 73 years, female, asian, stage:iic 396.4
TCGA-EB-A4OY-01A 65 years, female, white, stage:iiib 396.0
TCGA-EB-A44P-01A 58 years, female, white, stage:iic 377.4
TCGA-XV-AAZW-01A 62 years, female, white, stage:ii 374.5
TCGA-BF-AAP7-01A 76 years, female, white, stage:iic 373.5
TCGA-EB-A6QY-01A 71 years, male, white, stage:iic 368.6
TCGA-EB-A1NK-01A 48 years, male, white, stage:iic 358.1
TCGA-ER-A2NB-01A 57 years, male, white, stage:iiib 357.7
TCGA-EB-A51B-01A 53 years, male, white, stage:iic 347.2
TCGA-YG-AA3N-01A 67 years, male, stage:iic 344.9
TCGA-EB-A4OZ-01A 42 years, female, white, stage:iiic 344.1
TCGA-EB-A3XC-01A 74 years, male, white, stage:iic 334.9
TCGA-BF-A1PX-01A 56 years, male, white, stage:iiib 330.1
TCGA-EB-A85J-01A 66 years, female, white, stage:iib 329.9
TCGA-EB-A5FP-01A 65 years, female, white, stage:iv 328.3
TCGA-EB-A82B-01A 58 years, female, asian, stage:iii 327.2
TCGA-EB-A44O-01A 69 years, male, white, stage:iib 322.6
TCGA-EB-A3XB-01A 63 years, male, white, stage:ii 318.2
TCGA-EB-A42Z-01A 49 years, male, asian, stage:iiic 317.7
TCGA-D9-A4Z5-01A 68 years, male, white, stage:iib 317.2
TCGA-BF-AAP2-01A 62 years, male, white, stage:iib 315.9
TCGA-GF-A2C7-01A 48 years, male, white, stage:iic 314.4
TCGA-BF-A1PU-01A 46 years, female, white, stage:iic 297.6
TCGA-EB-A6QZ-01A 76 years, female, white, stage:iia 294.7
TCGA-XV-A9W5-01A 51 years, male, white, stage:i/ii nos 293.4
TCGA-EB-A41B-01A 76 years, female, white, stage:iic 290.4
TCGA-EB-A5SE-01A 73 years, male, white, stage:iib 288.0
TCGA-EB-A3XD-01A 53 years, female, white, stage:iic 287.1
TCGA-BF-A5ES-01A 76 years, female, white, stage:iic 285.8
TCGA-EB-A44N-01A 59 years, male, white, stage:iic 277.5
TCGA-EB-A299-01A 63 years, male, white, stage:iia 275.4
TCGA-FR-A726-01A 90 years, male, white, stage:iic 273.2
TCGA-BF-AAOU-01A 73 years, female, white, stage:iic 271.6
TCGA-BF-A1Q0-01A 80 years, male, white, stage:iic 271.6
TCGA-GF-A769-01A 39 years, male, white, stage:iic 262.4
TCGA-BF-A3DJ-01A 36 years, female, white, stage:iiib 258.2
TCGA-BF-AAP1-01A 86 years, male, white, stage:iic 257.8
TCGA-XV-A9W2-01A 81 years, male, white, stage:i 257.7
TCGA-ER-A196-01A 64 years, female, white, stage:iic 257.6
TCGA-EB-A41A-01A 90 years, male, white, stage:iic 257.0
TCGA-FS-A1ZN-01A 43 years, male, white, stage:iiia 257.0
TCGA-EB-A6R0-01A 58 years, female, white, stage:iic 253.3
TCGA-XV-AAZV-01A 56 years, female, white, stage:ii 247.8
TCGA-DA-A960-01A 73 years, male, white, stage:iib 247.1
TCGA-D9-A4Z3-01A 73 years, female, white, stage:iiic 241.7
TCGA-BF-A3DN-01A 81 years, female, white, stage:iiic 233.0
TCGA-ER-A42H-01A 77 years, male, white 232.7
TCGA-EB-A82C-01A 70 years, female, asian, stage:iic 231.2
TCGA-EB-A5VU-01A 56 years, male, asian, stage:iiib 229.7
TCGA-BF-A9VF-01A 77 years, male, white, stage:iic 228.0
TCGA-EB-A4IQ-01A 42 years, female, asian, stage:iiib 222.8
TCGA-BF-AAP6-01A 55 years, male, white, stage:iii 222.7
TCGA-EB-A24C-01A 56 years, male, white 221.0
TCGA-EB-A57M-01A 56 years, male, asian, stage:iiib 220.1
TCGA-EB-A3XE-01A 77 years, female, white, stage:iia 216.2
TCGA-ER-A19T-01A 51 years, male, white, stage:iv 216.1
TCGA-GN-A4U5-01A 61 years, female, white, stage:ib 214.5
TCGA-EB-A3Y6-01A 56 years, female, white, stage:iic 211.2
TCGA-FR-A3R1-01A 69 years, male, white, stage:iic 211.0
TCGA-EB-A4IS-01A 77 years, male, white, stage:iib 210.9
TCGA-EB-A550-01A 75 years, female, white, stage:iic 210.6
TCGA-EB-A4P0-01A 82 years, male, white, stage:iic 209.5
TCGA-ER-A19K-01A 79 years, female, white, stage:iic 207.0
TCGA-BF-A5EQ-01A 63 years, male, white, stage:iic 201.8
TCGA-FW-A5DX-01A 71 years, male, white, stage:iiic 190.6
TCGA-EB-A4XL-01A 56 years, female, white, stage:iic 189.1
TCGA-D9-A4Z2-01A 50 years, male, white, stage:iiic 186.1
TCGA-GN-A8LN-01A 68 years, male, white, stage:iic 180.2
TCGA-BF-A1PV-01A 74 years, female, white, stage:iic 176.4
TCGA-FR-A728-01A 54 years, female, white, stage:iiib 167.9
TCGA-D9-A3Z4-01A 54 years, male, white, stage:iiic 166.9
TCGA-EB-A553-01A 62 years, male, white, stage:iic 155.1
TCGA-EB-A551-01A 78 years, female, white, stage:iiic 153.5
TCGA-D3-A5GT-01A 43 years, male, white, stage:iiic 144.1
TCGA-BF-AAP8-01A 58 years, male, white, stage:iic 141.5
TCGA-EB-A3XF-01A 57 years, male, white, stage:iic 140.9
TCGA-ER-A2NF-01A 53 years, male, white, stage:iiib 138.2
TCGA-GN-A26C-01A 77 years, male, white, stage:iiic 137.6
TCGA-EB-A5UM-01A 48 years, female, white, stage:iic 135.7
TCGA-HR-A5NC-01A 90 years, female 132.3
TCGA-EB-A24D-01A 72 years, male, white, stage:iiib 124.3
TCGA-XV-A9VZ-01A 90 years, female, white, stage:ii 90.0
TCGA-GN-A263-01A 24 years, male, white, stage:iv 50.9
Show all

MELANOMA - Protein expression

 

Antibody HPA004177

Antibody CAB006252

 Antibody staining
  High
  Medium
  Low
  Not detected
   
 Intensity
  Strong
  Moderate
  Weak
  Negative
   
 Quantity
  >75%
  75%-25%
  <25%
  Rare
  Negative
   
 Location
  Cytoplasmic/membranous,nuclear
  Cytoplasmic/membranous
  Nuclear
  None
   

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