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TISSUE ATLAS PRIMARY DATA CEREBRAL CORTEX

GENE/PROTEIN

Antibody validation


Dictionary

Cerebral cortex

Tissue proteome

Brain
Extended brain samples

CEREBRAL CORTEX - Expression summary

Protein expression

h
m
l
n

RNA expression

HPA:42.1TPM
GTEx:4.9RPKM

CEREBRAL CORTEX - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glial cells:Low
Neuronal cells:Medium
Neuropil:Low
 

Antibody staining

Antibody HPA015027

 

Antibody HPA015762

 

Antibody CAB022698

 

Endothelial cells

Not detected   Not detected   Low  

Glial cells

Low   Low   Low  

Neuronal cells

Low   Medium   High  

Neuropil

Medium   Low   Medium  
     
     
     

CEREBRAL CORTEX - HPA RNA-seq

Average TPM

42.1

N/A Male, age 5 Sample 1
TPM: 41.3
overview Female, age 40 Sample 2
TPM: 47.7
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65
overview Male, age 70 Sample 3
TPM: 37.4
Cell types%
Neuronal cells: 35
Glial cells and endothelial cells: 65

CEREBRAL CORTEX - GTEx RNA-seq

Average RPKM

4.9

GTEx sample id

Sample description

RPKM

Brain - Cortex
RPKM: 4.6
Samples: 114

Max RPKM: 7.2
Min RPKM: 2.6
Std RPKM: 0.8
Median RPKM: 4.6
GTEX-PVOW-2526-SM-2XCF7 40-49 years, male 7.2
GTEX-QMR6-1426-SM-32PLA 50-59 years, male 6.6
GTEX-UTHO-3026-SM-3GAFB 60-69 years, male 6.5
GTEX-TSE9-3026-SM-3DB76 60-69 years, female 6.2
GTEX-11NUK-2926-SM-5A5MD 50-59 years, male 6.0
GTEX-12ZZX-2926-SM-5GCOQ 40-49 years, female 6.0
GTEX-144GL-3026-SM-5Q5CW 50-59 years, male 5.9
GTEX-WZTO-2926-SM-3NM9I 40-49 years, male 5.9
GTEX-12ZZZ-3026-SM-5BC67 60-69 years, male 5.8
GTEX-13NYC-2826-SM-5K7WR 60-69 years, male 5.7
GTEX-14A5I-2926-SM-5Q5CQ 50-59 years, female 5.7
GTEX-14BMV-3026-SM-5S2PQ 50-59 years, male 5.6
GTEX-ZAK1-3026-SM-5S2MJ 50-59 years, female 5.6
GTEX-13OW6-3026-SM-5J2MI 50-59 years, male 5.5
GTEX-RNOR-2326-SM-2TF4I 50-59 years, female 5.5
GTEX-ZUA1-3026-SM-59HJC 40-49 years, male 5.5
GTEX-11DXW-1126-SM-5H12Q 40-49 years, male 5.4
GTEX-131XW-3126-SM-5LZUC 50-59 years, female 5.4
GTEX-OXRN-2426-SM-2I5EQ 50-59 years, male 5.4
GTEX-T2IS-3026-SM-32QPM 20-29 years, female 5.4
GTEX-X4XX-3026-SM-3NMB2 60-69 years, male 5.4
GTEX-1128S-2726-SM-5H12C 60-69 years, female 5.3
GTEX-RU72-3026-SM-5SI7Y 50-59 years, female 5.3
GTEX-11DXY-3226-SM-5GIDE 60-69 years, male 5.2
GTEX-13OW7-3026-SM-5L3GY 50-59 years, male 5.2
GTEX-13PL6-3126-SM-5LUAR 40-49 years, female 5.2
GTEX-14ASI-3026-SM-5S2PN 60-69 years, male 5.2
GTEX-T5JC-2426-SM-3NMDB 20-29 years, male 5.2
GTEX-WHSE-3026-SM-3P5ZH 20-29 years, male 5.2
GTEX-YFC4-3126-SM-5PNV6 40-49 years, female 5.2
GTEX-12WSH-3026-SM-5CVNI 50-59 years, male 5.1
GTEX-131YS-3126-SM-5KLYT 60-69 years, female 5.1
GTEX-13FXS-3126-SM-5J2NN 50-59 years, male 5.1
GTEX-ZVT3-3026-SM-5E43N 60-69 years, female 5.1
GTEX-111FC-3126-SM-5GZZ2 60-69 years, male 5.0
GTEX-11EI6-3026-SM-5GZZO 60-69 years, male 5.0
GTEX-13QIC-2926-SM-5J2NF 60-69 years, female 5.0
GTEX-145MH-3026-SM-5Q5DZ 50-59 years, male 5.0
GTEX-145LS-3126-SM-5Q5BY 60-69 years, female 4.9
GTEX-145MG-3026-SM-5RQJA 50-59 years, male 4.9
GTEX-WVLH-3026-SM-3MJG9 50-59 years, male 4.9
GTEX-ZYFD-3026-SM-5E44C 50-59 years, male 4.9
GTEX-12WSD-3126-SM-5HL7P 60-69 years, female 4.8
GTEX-13FHO-3026-SM-5J1O9 60-69 years, male 4.8
GTEX-13IVO-2926-SM-5L3CZ 70-79 years, male 4.8
GTEX-13O3O-3126-SM-5KM3H 60-69 years, female 4.8
GTEX-QDT8-2926-SM-32PKC 30-39 years, female 4.8
GTEX-R55F-1326-SM-5S2V4 50-59 years, male 4.8
GTEX-WWYW-3126-SM-3NB39 50-59 years, female 4.8
GTEX-11GSP-3226-SM-5986O 60-69 years, female 4.7
GTEX-11O72-2926-SM-5BC4V 40-49 years, male 4.7
GTEX-1399T-3026-SM-5KLZC 60-69 years, male 4.7
GTEX-13OVH-3026-SM-5MR4N 70-79 years, male 4.7
GTEX-13VXU-2926-SM-5LU5C 50-59 years, male 4.7
GTEX-XOTO-3026-SM-4B65M 50-59 years, male 4.7
GTEX-11GSO-2926-SM-5HL73 60-69 years, male 4.6
GTEX-11PRG-2926-SM-5987A 50-59 years, male 4.6
GTEX-WL46-2926-SM-3LK82 50-59 years, male 4.6
GTEX-XLM4-3026-SM-4AT6L 60-69 years, male 4.6
GTEX-11EMC-3226-SM-5EGKW 60-69 years, female 4.5
GTEX-11ZUS-2926-SM-5FQSL 30-39 years, male 4.5
GTEX-12126-1026-SM-5P9JJ 20-29 years, male 4.5
GTEX-13JVG-3126-SM-5L3FH 60-69 years, male 4.5
GTEX-13X6J-3026-SM-5Q5CU 50-59 years, male 4.5
GTEX-145MF-2726-SM-5O995 50-59 years, male 4.5
GTEX-T6MN-2626-SM-32PMQ 50-59 years, male 4.5
GTEX-ZE7O-3126-SM-5HL5X 50-59 years, female 4.5
GTEX-11ONC-2926-SM-5P9JM 60-69 years, male 4.4
GTEX-13O3Q-2926-SM-5KM45 50-59 years, male 4.4
GTEX-13X6K-2926-SM-5Q5D5 60-69 years, female 4.4
GTEX-QVJO-1426-SM-2S1QY 60-69 years, female 4.4
GTEX-1313W-3126-SM-5LZUI 50-59 years, female 4.3
GTEX-PWO3-0926-SM-2I5EY 60-69 years, female 4.3
GTEX-Q2AG-2926-SM-2HMJ3 40-49 years, female 4.3
GTEX-QVUS-2826-SM-3GADB 60-69 years, female 4.3
GTEX-Y8DK-0826-SM-4TT3T 60-69 years, male 4.3
GTEX-YJ89-3026-SM-5IFJI 60-69 years, male 4.3
GTEX-12ZZW-2926-SM-5LZUP 50-59 years, male 4.2
GTEX-139T8-1026-SM-5J2MC 60-69 years, male 4.2
GTEX-13OW8-2826-SM-5L3GC 60-69 years, male 4.2
GTEX-13S7M-3126-SM-5RQJQ 60-69 years, female 4.2
GTEX-Z93S-2926-SM-57WB9 50-59 years, male 4.2
GTEX-12WSC-3026-SM-5GCNF 50-59 years, male 4.1
GTEX-1192X-3126-SM-5N9BY 50-59 years, male 4.0
GTEX-13FHP-3026-SM-5IJBS 50-59 years, male 4.0
GTEX-13OVJ-2826-SM-5L3GW 50-59 years, female 4.0
GTEX-NPJ8-1526-SM-2D7VU 40-49 years, male 4.0
GTEX-12ZZY-3026-SM-5GCOU 60-69 years, male 3.9
GTEX-13FLW-1426-SM-5K7YE 50-59 years, male 3.9
GTEX-13JUV-2926-SM-5LZX7 40-49 years, female 3.9
GTEX-13SLX-3126-SM-5S2Q5 50-59 years, female 3.9
GTEX-144FL-3026-SM-5O99C 50-59 years, male 3.9
GTEX-13NYB-3026-SM-5IJD7 40-49 years, male 3.8
GTEX-13NYS-3126-SM-5KLYV 60-69 years, male 3.8
GTEX-1445S-3026-SM-5O9BR 60-69 years, male 3.8
GTEX-ZZPT-3026-SM-5GZXH 50-59 years, male 3.8
GTEX-11TTK-2926-SM-5PNYP 60-69 years, female 3.7
GTEX-132Q8-3026-SM-5PNVG 60-69 years, male 3.7
GTEX-147GR-3026-SM-5S2ML 60-69 years, male 3.7
GTEX-117XS-3026-SM-5N9CA 60-69 years, male 3.6
GTEX-11OF3-2926-SM-5HL78 60-69 years, male 3.6
GTEX-13PVQ-3026-SM-5SI93 50-59 years, male 3.6
GTEX-Y111-2726-SM-4TT3N 50-59 years, male 3.6
GTEX-NPJ7-2726-SM-2I3FT 60-69 years, female 3.5
GTEX-11WQK-3026-SM-5EQL6 50-59 years, male 3.4
GTEX-12WSA-2926-SM-5EQ4D 60-69 years, male 3.4
GTEX-11GS4-3126-SM-5A5LH 60-69 years, male 3.3
GTEX-11OC5-0726-SM-5P9JK 60-69 years, male 3.3
GTEX-N7MT-1126-SM-5SI7V 60-69 years, female 3.2
GTEX-X585-3026-SM-46MWF 50-59 years, male 3.2
GTEX-ZAJG-3126-SM-5HL9J 50-59 years, female 3.0
GTEX-11NV4-2126-SM-5N9DS 60-69 years, male 2.8
GTEX-13G51-3026-SM-5IJB8 60-69 years, male 2.8
GTEX-1117F-3226-SM-5N9CT 60-69 years, female 2.6
Show all
Brain - Frontal Cortex (BA9)
RPKM: 5.3
Samples: 108

Max RPKM: 10.8
Min RPKM: 3.0
Std RPKM: 1.2
Median RPKM: 5.2
GTEX-QDT8-0011-R10A-SM-32PKG 30-39 years, female 10.8
GTEX-QVUS-0011-R10A-SM-3GIK3 60-69 years, female 7.7
GTEX-WVLH-0011-R10A-SM-3MJFM 50-59 years, male 7.7
GTEX-QMR6-0011-R10A-SM-32PKO 50-59 years, male 7.3
GTEX-Q2AG-0011-R10A-SM-2HMLA 40-49 years, female 7.2
GTEX-131XH-0011-R10a-SM-5EGLJ 50-59 years, male 7.0
GTEX-S7SE-0011-R10A-SM-2XCDF 50-59 years, male 7.0
GTEX-12WSM-0011-R10a-SM-5DUWV 60-69 years, male 6.9
GTEX-YFC4-0011-R10a-SM-4SOK5 40-49 years, female 6.9
GTEX-NPJ7-0011-R10A-SM-2I3E5 60-69 years, female 6.8
GTEX-12126-0011-R10b-SM-5BC6T 20-29 years, male 6.7
GTEX-12ZZX-0011-R10b-SM-5DUWK 40-49 years, female 6.7
GTEX-13OVL-0011-R10a-SM-5L3GS 50-59 years, male 6.6
GTEX-145MG-0011-R10a-SM-5PNWG 50-59 years, male 6.6
GTEX-13X6K-0011-R10a-SM-5P9JR 60-69 years, female 6.5
GTEX-12WSE-0011-R10b-SM-5P9JV 20-29 years, male 6.4
GTEX-13FHO-0011-R10b-SM-5J2MM 60-69 years, male 6.4
GTEX-13X6I-0011-R10a-SM-5PNWI 60-69 years, male 6.4
GTEX-14BIL-0011-R10a-SM-5SI75 50-59 years, male 6.4
GTEX-T5JC-0011-R10A-SM-32PM2 20-29 years, male 6.4
GTEX-T6MN-0011-R10A-SM-32QP7 50-59 years, male 6.4
GTEX-WZTO-0011-R10B-SM-4E3KB 40-49 years, male 6.4
GTEX-13S7M-0011-R10b-SM-5PNZB 60-69 years, female 6.3
GTEX-P44H-0011-R10A-SM-2XCEK 40-49 years, male 6.3
GTEX-WL46-0011-R10A-SM-3MJFQ 50-59 years, male 6.3
GTEX-YJ89-0011-R10a-SM-4SOK9 60-69 years, male 6.3
GTEX-145LU-0011-R10a-SM-5PNWJ 50-59 years, male 6.2
GTEX-X4XX-0011-R10B-SM-46MWO 60-69 years, male 6.2
GTEX-13JUV-0011-R10b-SM-5LZXR 40-49 years, female 6.1
GTEX-QVJO-0011-R10A-SM-2S1QJ 60-69 years, female 6.1
GTEX-131YS-0011-R10b-SM-5EQ5N 60-69 years, female 6.0
GTEX-145MH-0011-R10b-SM-5PNUK 50-59 years, male 6.0
GTEX-NPJ8-0011-R10A-SM-2YUMO 40-49 years, male 6.0
GTEX-OXRN-0011-R10A-SM-2I5GC 50-59 years, male 6.0
GTEX-11H98-0011-R10b-SM-5NQ98 50-59 years, male 5.9
GTEX-1445S-0011-R10a-SM-5PNWB 60-69 years, male 5.9
GTEX-Z93S-0011-R10a-SM-4RGNM 50-59 years, male 5.9
GTEX-ZVZQ-0011-R10b-SM-51MRT 60-69 years, female 5.9
GTEX-WWYW-0011-R10A-SM-3NB35 50-59 years, female 5.8
GTEX-11WQC-0011-R10a-SM-57WCT 60-69 years, male 5.7
GTEX-13OW8-0011-R10a-SM-5L3H6 60-69 years, male 5.7
GTEX-13O3Q-0011-R10b-SM-5KM39 50-59 years, male 5.5
GTEX-13QJC-0011-R10a-SM-5SI63 60-69 years, female 5.5
GTEX-12WSD-0011-R10b-SM-5GU79 60-69 years, female 5.4
GTEX-13QIC-0011-R10a-SM-5O9C7 60-69 years, female 5.4
GTEX-13SLW-0011-R10a-SM-5S2UI 70-79 years, male 5.4
GTEX-145LS-0011-R10a-SM-5PNUQ 60-69 years, female 5.4
GTEX-XLM4-0011-R10A-SM-4AT5P 60-69 years, male 5.4
GTEX-ZAB4-0011-R10a-SM-4SOKH 40-49 years, male 5.4
GTEX-12WSH-0011-R10a-SM-5LZUS 50-59 years, male 5.3
GTEX-13OW6-0011-R10a-SM-5L3HE 50-59 years, male 5.3
GTEX-NL3H-0011-R10A-SM-2I3E9 60-69 years, male 5.3
GTEX-12ZZY-0011-R10b-SM-5HL7W 60-69 years, male 5.2
GTEX-13FLV-0011-R10b-SM-5LZZ2 50-59 years, male 5.2
GTEX-13OVJ-0011-R10b-SM-5L3HT 50-59 years, female 5.2
GTEX-14753-0011-R10b-SM-5S2WE 60-69 years, male 5.2
GTEX-147F4-0011-R10b-SM-5S2WC 50-59 years, male 5.2
GTEX-14ASI-0011-R10b-SM-5S2VZ 60-69 years, male 5.2
GTEX-ZF28-0011-R10a-SM-4WWEH 60-69 years, male 5.2
GTEX-TSE9-0011-R10A-SM-3DB7O 60-69 years, female 5.1
GTEX-ZVT3-0011-R10b-SM-57WB6 60-69 years, female 5.1
GTEX-11GSP-0011-R10a-SM-5NQ7J 60-69 years, female 5.0
GTEX-1313W-0011-R10b-SM-5DUXA 50-59 years, female 5.0
GTEX-132Q8-0011-R10b-SM-5DUWZ 60-69 years, male 5.0
GTEX-139TS-0011-R10a-SM-5K7TU 60-69 years, male 5.0
GTEX-13CZV-0011-R10b-SM-5LZYD 60-69 years, male 5.0
GTEX-13FTZ-0011-R10b-SM-5KLZS 60-69 years, male 5.0
GTEX-13X6J-0011-R10b-SM-5PNWA 50-59 years, male 5.0
GTEX-14BIN-0011-R10a-SM-5S2UA 50-59 years, female 4.9
GTEX-X585-0011-R10A-SM-46MUY 50-59 years, male 4.9
GTEX-ZDXO-0011-R10a-SM-4WWD8 60-69 years, male 4.9
GTEX-ZUA1-0011-R10a-SM-51MT6 40-49 years, male 4.9
GTEX-12ZZZ-0011-R10a-SM-5P9HC 60-69 years, male 4.8
GTEX-147GR-0011-R10b-SM-5S2UM 60-69 years, male 4.8
GTEX-12WSF-0011-R10a-SM-5LZVH 70-79 years, male 4.7
GTEX-N7MT-0011-R10A-SM-2I3E1 60-69 years, female 4.7
GTEX-Y8DK-0011-R10A-SM-4SOK1 60-69 years, male 4.7
GTEX-12WSC-0011-R10a-SM-5GU57 50-59 years, male 4.6
GTEX-13FXS-0011-R10a-SM-5J2MA 50-59 years, male 4.6
GTEX-N7MS-0011-R10A-SM-2HMJK 60-69 years, male 4.6
GTEX-X261-0011-R10B-SM-4E3JT 50-59 years, male 4.6
GTEX-12ZZW-0011-R10b-SM-5HL9X 50-59 years, male 4.4
GTEX-13G51-0011-R10b-SM-5LZYF 60-69 years, male 4.4
GTEX-13RTJ-0011-R10b-SM-5O9CW 60-69 years, male 4.4
GTEX-13FLW-0011-R10b-SM-5LZZF 50-59 years, male 4.3
GTEX-12WSA-0011-R10b-SM-5P9ET 60-69 years, male 4.2
GTEX-OXRO-0011-R10A-SM-2I5EH 60-69 years, female 4.2
GTEX-X4EP-0011-R10B-SM-4QASJ 60-69 years, female 4.2
GTEX-ZV68-0011-R10a-SM-51MT7 50-59 years, female 4.2
GTEX-ZXG5-0011-R10a-SM-57WDD 60-69 years, male 4.1
GTEX-13N1W-0011-R10b-SM-5MR4H 70-79 years, male 4.0
GTEX-13NYB-0011-R10a-SM-5KM43 40-49 years, male 4.0
GTEX-13O3O-0011-R10a-SM-5LUA9 60-69 years, female 4.0
GTEX-1477Z-0011-R10b-SM-5S2RF 60-69 years, male 4.0
GTEX-RVPU-0011-R10A-SM-2XCAH 50-59 years, male 4.0
GTEX-XMD1-0011-R10A-SM-4AT4A 60-69 years, male 3.9
GTEX-13JVG-0011-R10b-SM-5KM2P 60-69 years, male 3.8
GTEX-11ZUS-0011-R10b-SM-5BC79 30-39 years, male 3.7
GTEX-13N2G-0011-R10a-SM-5MR34 60-69 years, male 3.7
GTEX-13OW7-0011-R10a-SM-5L3H3 50-59 years, male 3.7
GTEX-NL4W-0011-R10A-SM-2I3DY 50-59 years, male 3.7
GTEX-11WQK-0011-R10a-SM-5BC6R 50-59 years, male 3.5
GTEX-13NZA-0011-R10b-SM-5KM54 60-69 years, male 3.5
GTEX-13NYS-0011-R10a-SM-5MR4S 60-69 years, male 3.2
GTEX-131XW-0011-R10a-SM-5DUVA 50-59 years, female 3.1
GTEX-13SLX-0011-R10a-SM-5P9HV 50-59 years, female 3.1
GTEX-13IVO-0011-R10a-SM-5LZY3 70-79 years, male 3.0
GTEX-ZE7O-0011-R10a-SM-57WAZ 50-59 years, female 3.0
Show all

CEREBRAL CORTEX - FANTOM5 CAGE

No Fantom CAGE analysis found for this gene / tissue

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