Fields »
ABOUT
HELP
BLOG
CTAGE5

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:13.5TPM
GTEx:0.7RPKM
FANTOM5:23.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Chondrocytes:Not available
Peripheral nerve:Not available
 

Antibody staining

Antibody HPA000387

  

Antibody HPA000922

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Chondrocytes

 Not detected  

Peripheral nerve

 Not detected  
   
   
   

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Not detected
Fibroblasts:Not detected
Peripheral nerve:Low
 
 

Antibody staining

Antibody HPA000387

  

Antibody HPA000922

  

Adipocytes

 Not detected   Not detected  

Fibroblasts

 Not detected   Not detected  

Peripheral nerve

 Low   Not detected  
      
   
   
   

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

13.5
N/A Female, age 80 Sample 1
TPM: 9.9
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 13.2
N/A Female, age 57 Sample 3
TPM: 11.9
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 14.9
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 17.3
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

0.7

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 0.7
Samples: 350

Max RPKM: 1.8
Min RPKM: 0.0
Std RPKM: 0.2
Median RPKM: 0.7
GTEX-131XE-2426-SM-5EQ5V 50-59 years, male 1.8
GTEX-ZVP2-1826-SM-5GU62 50-59 years, male 1.5
GTEX-144GL-0226-SM-5QGOX 50-59 years, male 1.4
GTEX-OOBJ-0226-SM-2YUMM 60-69 years, male 1.4
GTEX-117YX-2226-SM-5EGJJ 50-59 years, male 1.3
GTEX-1211K-2226-SM-5FQU6 60-69 years, female 1.3
GTEX-12WSA-0326-SM-5BC6I 60-69 years, male 1.3
GTEX-13SLX-0426-SM-5QGRC 50-59 years, female 1.3
GTEX-S4Z8-1726-SM-3K2AX 60-69 years, male 1.3
GTEX-11ONC-2526-SM-5986W 60-69 years, male 1.2
Show all
Adipose - Visceral (Omentum)
RPKM: 0.6
Samples: 227

Max RPKM: 1.5
Min RPKM: 0.1
Std RPKM: 0.2
Median RPKM: 0.6
GTEX-12ZZX-1726-SM-5BC63 40-49 years, female 1.5
GTEX-12WSA-1626-SM-5EGJV 60-69 years, male 1.2
GTEX-13U4I-1726-SM-5J1MF 40-49 years, female 1.2
GTEX-ZDTT-0526-SM-5HL4M 60-69 years, male 1.2
GTEX-ZG7Y-1626-SM-5S2NO 50-59 years, male 1.2
GTEX-13D11-0526-SM-5LZYM 50-59 years, female 1.1
GTEX-WK11-2426-SM-3NMAA 50-59 years, male 1.1
GTEX-XBED-1326-SM-4AT4F 60-69 years, male 1.1
GTEX-ZE9C-1326-SM-5S2OW 60-69 years, male 1.1
GTEX-ZTPG-2326-SM-57WFL 20-29 years, female 1.1
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

23.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 23.5
FF:10010-101C1 65,65,76 years, mixed 23.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.