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CCT5

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:86.2TPM
GTEx:25.3RPKM
FANTOM5:59.9Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Not detected
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA002238

  

Antibody HPA005958

  

Antibody CAB006271

  

Endothelial cells

 Not detected   Not detected   Not detected  

Glandular cells

 Medium   Medium   Medium  

Peripheral nerve/ganglion

 Low   Medium  
     
     

COLON - HPA RNA-seq

Average TPM

86.2
overview Male, age 54 Sample 1
TPM: 68.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 69.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 66.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 81.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 66.6
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 105.3
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 132.8
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 83.8
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 83.1
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 120.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 97.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 90
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 55.2
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

25.3

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 21.0
Samples: 149

Max RPKM: 71.3
Min RPKM: 11.1
Std RPKM: 7.8
Median RPKM: 19.3
GTEX-132AR-2826-SM-5IJFV 50-59 years, female 71.3
GTEX-11TT1-0926-SM-5GU5M 20-29 years, male 58.2
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 37.8
GTEX-11I78-1326-SM-5PNY9 50-59 years, female 37.1
GTEX-13O1R-2426-SM-5KLZZ 60-69 years, male 35.5
GTEX-ZTTD-2626-SM-57WEX 50-59 years, male 35.4
GTEX-12WSL-1826-SM-5LZW9 50-59 years, male 34.3
GTEX-ZAJG-2626-SM-5S2NU 50-59 years, female 34.3
GTEX-131XG-1526-SM-5GCNQ 50-59 years, female 33.9
GTEX-12WSJ-1426-SM-5GCON 40-49 years, female 32.5
Show all
Colon - Transverse
RPKM: 28.6
Samples: 196

Max RPKM: 75.7
Min RPKM: 12.7
Std RPKM: 10.2
Median RPKM: 26.6
GTEX-11TT1-1026-SM-5PNW7 20-29 years, male 75.7
GTEX-132AR-2726-SM-5PNVN 50-59 years, female 59.3
GTEX-R53T-1326-SM-48FCQ 50-59 years, female 56.8
GTEX-QDVN-1326-SM-48TZ3 50-59 years, male 54.8
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 54.5
GTEX-PWOO-1326-SM-48TCJ 40-49 years, female 54.5
GTEX-13S86-1626-SM-5Q5C5 40-49 years, male 54.3
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 54.3
GTEX-XV7Q-2126-SM-4BRVX 40-49 years, female 54.0
GTEX-13W3W-2126-SM-5K7UX 60-69 years, female 52.2
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

59.9

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 59.9
FF:10014-101C5 62,83,84 years, mixed 59.9

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.