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ABCB9

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:2.3TPM
GTEx:0.5RPKM
FANTOM5:4.1Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Medium
Glandular cells:Medium
Peripheral nerve/ganglion:Medium
 

Antibody staining

Antibody HPA035114

  

Antibody CAB033052

  

Endothelial cells

 Medium   Medium  

Glandular cells

 High   High  

Peripheral nerve/ganglion

 Medium   Medium  
   
   
   

COLON - HPA RNA-seq

Average TPM

2.3
overview Male, age 54 Sample 1
TPM: 1.9
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 1.3
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 3.5
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 2.5
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 3.1
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 1.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 2.5
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 1.9
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 1.7
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 1.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 2.3
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 2.1
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 3.6
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

0.5

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 0.4
Samples: 149

Max RPKM: 1.0
Min RPKM: 0.1
Std RPKM: 0.1
Median RPKM: 0.4
GTEX-Z93S-2626-SM-57WBX 50-59 years, male 1.0
GTEX-13SLW-2826-SM-5Q5ES 70-79 years, male 0.9
GTEX-145LS-2926-SM-5O99G 60-69 years, female 0.9
GTEX-147GR-2826-SM-5RQK8 60-69 years, male 0.9
GTEX-11DXY-2026-SM-5N9CZ 60-69 years, male 0.8
GTEX-13FHO-2726-SM-5K7VG 60-69 years, male 0.8
GTEX-13OW6-2226-SM-5N9FL 50-59 years, male 0.8
GTEX-13X6I-2726-SM-5Q5ET 60-69 years, male 0.8
GTEX-145MH-2726-SM-5QGQ6 50-59 years, male 0.8
GTEX-WFON-1326-SM-4LVMN 40-49 years, male 0.8
Show all
Colon - Transverse
RPKM: 0.6
Samples: 196

Max RPKM: 1.5
Min RPKM: 0.1
Std RPKM: 0.2
Median RPKM: 0.6
GTEX-14C38-2626-SM-5RQI4 50-59 years, male 1.5
GTEX-ZF2S-1926-SM-4WWAN 50-59 years, female 1.4
GTEX-QLQW-0426-SM-447A7 30-39 years, male 1.3
GTEX-TKQ2-1326-SM-4DXT9 50-59 years, male 1.2
GTEX-UJHI-1126-SM-4IHLN 50-59 years, female 1.2
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 1.1
GTEX-13FTW-1826-SM-5IJEN 40-49 years, male 1.1
GTEX-13O3O-2526-SM-5L3DR 60-69 years, female 1.1
GTEX-14BMV-2426-SM-5S2PP 50-59 years, male 1.1
GTEX-QV31-0826-SM-4R1KR 30-39 years, male 1.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

4.1

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 4.1
FF:10014-101C5 62,83,84 years, mixed 4.1

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.