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SLC25A4

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:4.7TPM
GTEx:28.4RPKM
FANTOM5:144.6Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:Low
Glandular cells:Medium
Peripheral nerve/ganglion:Not detected
 

Antibody staining

Antibody HPA071684

  

Endothelial cells

 Low  

Glandular cells

 Medium  

Peripheral nerve/ganglion

 Not detected  
 
 
 

COLON - HPA RNA-seq

Average TPM

4.7
overview Male, age 54 Sample 1
TPM: 3.1
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 2.4
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 1.7
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 3.1
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 1.4
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 16
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 2.9
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 3.1
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 8.2
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 3.7
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 5.4
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 5.7
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 4.5
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

28.4

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 38.7
Samples: 149

Max RPKM: 70.5
Min RPKM: 10.6
Std RPKM: 10.9
Median RPKM: 39.8
GTEX-XAJ8-0726-SM-47JY5 40-49 years, male 70.5
GTEX-11P7K-1826-SM-5HL5A 30-39 years, male 66.7
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 66.4
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 65.3
GTEX-ZG7Y-1826-SM-4WWD3 50-59 years, male 58.3
GTEX-ZPCL-1626-SM-57WGC 60-69 years, female 57.2
GTEX-ZPU1-1726-SM-4WWFV 40-49 years, male 56.5
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 56.4
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 56.3
GTEX-ZLFU-1426-SM-4WWEU 40-49 years, male 56.2
Show all
Colon - Transverse
RPKM: 20.5
Samples: 196

Max RPKM: 58.9
Min RPKM: 4.3
Std RPKM: 12.2
Median RPKM: 15.9
GTEX-Y8LW-1226-SM-4WWDP 50-59 years, female 58.9
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 56.3
GTEX-XAJ8-0426-SM-47JYJ 40-49 years, male 52.9
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 52.3
GTEX-111YS-1626-SM-5GZZ9 60-69 years, male 47.0
GTEX-XXEK-1926-SM-4BRVD 50-59 years, male 45.4
GTEX-RWS6-1826-SM-47JXX 60-69 years, female 44.3
GTEX-13VXT-2426-SM-5LU46 20-29 years, female 43.9
GTEX-117YX-0826-SM-5H11J 50-59 years, male 43.4
GTEX-T6MO-0826-SM-4DM51 40-49 years, female 43.1
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

144.6

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 144.6
FF:10014-101C5 62,83,84 years, mixed 144.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.