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ATP5A1

COLON - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:417.8TPM
GTEx:202.2RPKM
FANTOM5:236.5Tags Per Million

COLON - Annotated protein expression

Annotated protein
expression

Endothelial cells:High
Glandular cells:High
Peripheral nerve/ganglion:High
 

Antibody staining

Antibody HPA040622

  

Antibody HPA044202

  

Antibody CAB013067

  

Endothelial cells

 Medium   High   High  

Glandular cells

 High   High   High  

Peripheral nerve/ganglion

 High   High   High  
     
     
     

COLON - HPA RNA-seq

Average TPM

417.8
overview Male, age 54 Sample 1
TPM: 313.2
Cell types%
Glandular cells: 65
Smooth muscle cells: 10
Other cell types: 25
overview Female, age 57 Sample 2
TPM: 353.8
Cell types%
Glandular cells: 40
Smooth muscle cells: 5
Other cell types: 55
overview Male, age 80 Sample 3
TPM: 498.3
Cell types%
Glandular cells: 55
Smooth muscle cells: 5
Other cell types: 40
overview Male, age 68 Sample 4
TPM: 393
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 68 Sample 5
TPM: 213.3
Cell types%
Glandular cells: 25
Smooth muscle cells: 5
Other cell types: 70
overview Female, age 61 Sample 6
TPM: 465.7
Cell types%
Glandular cells: 5
Smooth muscle cells: 65
Other cell types: 30
overview Male, age 80 Sample 7
TPM: 609.4
Cell types%
Glandular cells: 15
Smooth muscle cells: 20
Other cell types: 65
overview Female, age 78 Sample 8
TPM: 457
Cell types%
Glandular cells: 45
Smooth muscle cells: 5
Other cell types: 50
overview Male, age 84 Sample 9
TPM: 382.3
Cell types%
Glandular cells: 50
Smooth muscle cells: 15
Other cell types: 35
overview Male, age 80 Sample 10
TPM: 527.9
Cell types%
Glandular cells: 20
Smooth muscle cells: 35
Other cell types: 45
overview Female, age 78 Sample 11
TPM: 504.9
Cell types%
Glandular cells: 35
Smooth muscle cells: 10
Other cell types: 55
overview Female, age 69 Sample 12
TPM: 437.2
Cell types%
Glandular cells: 10
Smooth muscle cells: 45
Other cell types: 45
overview Female, age 72 Sample 13
TPM: 275.1
Cell types%
Glandular cells: 20
Smooth muscle cells: 15
Other cell types: 65

COLON - GTEx RNA-seq

Average RPKM

202.2

GTEx sample id

Sample description

RPKM
Colon - Sigmoid
RPKM: 162.7
Samples: 149

Max RPKM: 257.3
Min RPKM: 64.5
Std RPKM: 33.4
Median RPKM: 163.9
GTEX-1399U-2226-SM-5KLZI 50-59 years, female 257.3
GTEX-YEC3-2026-SM-4WWFL 50-59 years, male 248.1
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 242.9
GTEX-ZP4G-1526-SM-57WE5 20-29 years, female 234.2
GTEX-ZTSS-1226-SM-51MSZ 40-49 years, male 232.6
GTEX-ZT9W-1726-SM-51MS3 50-59 years, male 226.3
GTEX-ZVT2-1726-SM-51MRO 50-59 years, female 225.9
GTEX-ZPIC-2626-SM-57WE2 40-49 years, female 220.5
GTEX-11ZTT-1626-SM-5EQKR 60-69 years, female 217.0
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 214.9
Show all
Colon - Transverse
RPKM: 232.3
Samples: 196

Max RPKM: 428.8
Min RPKM: 64.5
Std RPKM: 69.5
Median RPKM: 227.7
GTEX-U4B1-1126-SM-4DXV3 40-49 years, male 428.8
GTEX-T5JW-1126-SM-4DM5V 20-29 years, female 416.5
GTEX-1399R-2226-SM-5P9JB 30-39 years, male 392.8
GTEX-131XG-1826-SM-5LZV4 50-59 years, female 385.9
GTEX-YF7O-1726-SM-5IFJ9 50-59 years, male 370.0
GTEX-XUJ4-2026-SM-4BOOW 60-69 years, female 361.4
GTEX-ZPIC-2226-SM-57WDX 40-49 years, female 356.1
GTEX-111CU-1426-SM-5GZYP 50-59 years, male 353.4
GTEX-146FQ-1926-SM-5NQBY 30-39 years, male 352.3
GTEX-145LT-0926-SM-5LU9C 40-49 years, male 351.4
Show all

COLON - FANTOM5 CAGE

Average Tags Per Million

236.5

FANTOM5 sample id

Sample description

Tags Per Million
Colon
Tags Per Million: 236.5
FF:10014-101C5 62,83,84 years, mixed 236.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.