Fields »
ABOUT
HELP
BLOG
RGPD3

GENERAL INFORMATION

Gene name

 RGPD3

Gene description

 RANBP2-like and GRIP domain containing 3

Protein class

 Predicted intracellular proteins

Predicted localization

 Intracellular

Number of transcripts

 2
SHOW MORE

HUMAN PROTEIN ATLAS INFORMATION

RNA tissue category
HPA:Tissue enriched (testis)
GTEx:Tissue enriched (testis)

Protein evidence

 Evidence at transcript level

Protein expression

 Estimation of protein expression could not be performed. View primary data.

DATA RELIABILITY

Data reliability
description

 RNA-based expert annotation gave inconclusive results. Caution, targets protein from more than one gene.

Reliability score

 Uncertain based on 2 antibodies.
HPA049497 , HPA051675
SHOW MORE

RNA AND PROTEIN EXPRESSION SUMMARY
RNA expression (TPM) Protein expression (score)
Brain
N/A
Hippocampus
N/A
N/A
Caudate
N/A
N/A
Cerebellum
N/A
N/A
Endocrine tissues
N/A
Bone marrow & immune system
N/A
Appendix
N/A
Tonsil
N/A
Spleen
N/A
Muscle tissues
N/A
Lung
N/A
Nasopharynx
N/A
N/A
Bronchus
N/A
N/A
Lung
N/A
Liver & gallbladder
N/A
Liver
N/A
Pancreas
N/A
Pancreas
N/A
Gastrointestinal tract
N/A
Oral mucosa
N/A
N/A
Esophagus
N/A
Stomach
N/A
Duodenum
N/A
Colon
N/A
Rectum
N/A
Kidney & urinary bladder
N/A
Kidney
N/A
Male tissues
N/A
Testis
N/A
Prostate
N/A
Female tissues
N/A
Breast
N/A
Vagina
N/A
N/A
Ovary
N/A
Placenta
N/A
Adipose & soft tissue
N/A
Soft tissue
N/A
N/A
Skin
N/A
Skin
N/A
Cerebral cortex

Lymph node

Liver

Colon

Kidney

Testis

PROTEIN EXPRESSION OVERVIEW
RNA-based expert annotation could not be performed, due to inconclusive results. View immunohistochemistry primary data.

RNA EXPRESSION OVERVIEW
HPA dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (testis)
GTEx dataset
Organ
Expression
Alphabetical
RNA tissue category: Tissue enriched (testis)

GENE INFORMATION

Gene name

 RGPD3 (HGNC Symbol)

Synonyms

 RGP3

Description

 RANBP2-like and GRIP domain containing 3 (HGNC Symbol)

Entrez gene summary

 This gene is located in a cluster of Ran-binding protein related genes on chromosome 2 which arose through duplication in primates. The encoded protein contains an N-terminal TPR (tetratricopeptide repeat) domain, two Ran-binding domains, and a C-terminal GRIP domain (golgin-97, RanBP2alpha, Imh1p and p230/golgin-245) domain. [provided by RefSeq, Sep 2011]

Chromosome

 2

Cytoband

 q12.2

Chromosome location (bp)

 106391290 - 106468376

Protein evidence

 Evidence at transcript level (all genes)

Ensembl

 ENSG00000153165 (version 83.38)

Entrez gene

 653489

UniProt

 A6NKT7 (UniProt - Inferred from homology)

neXtProt

 NX_A6NKT7

Antibodypedia

 RGPD3 antibodies

PROTEIN BROWSER
RGPD3-002
RGPD3-201

PROTEIN INFORMATION

Splice variant

UniProt

Protein class

Gene ontology

Length & mass

Signal peptide
(predicted)

Transmembrane regions
(predicted)
RGPD3-002
ENSP00000386588
ENST00000409886
A6NKT7 [Direct mapping]
RanBP2-like and GRIP domain-containing protein 3
Show all
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
Show all
GO:0000042 [protein targeting to Golgi]
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0046907 [intracellular transport]
Show all
 1758 aa
197.5 kDa 		No 0
RGPD3-201
ENSP00000303659
ENST00000304514
J3KNE0 [Direct mapping]
RanBP2-like and GRIP domain-containing protein 3
Show all
   MEMSAT3 predicted membrane proteins
Predicted intracellular proteins
Show all
GO:0000042 [protein targeting to Golgi]
GO:0005515 [protein binding]
GO:0005622 [intracellular]
GO:0046907 [intracellular transport]
Show all
 1760 aa
197.6 kDa 		No 0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.