Fields »
ABOUT
HELP
BLOG
AHCTF1

SOFT TISSUE - Expression summary

Protein expression
h
m
l
n

RNA expression
HPA:17.7TPM
GTEx:9.4RPKM
FANTOM5:42.5Tags Per Million

SOFT TISSUE 1 - Annotated protein expression

Annotated protein
expression

Adipocytes:Medium
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA031658

  

Adipocytes

 Medium  

Fibroblasts

 Low  

Peripheral nerve

 Low  
 
 
 

SOFT TISSUE 2 - Annotated protein expression

Annotated protein
expression

Adipocytes:Low
Fibroblasts:Low
Peripheral nerve:Low
 

Antibody staining

Antibody HPA031658

  

Adipocytes

 Not detected  

Fibroblasts

 Low  

Peripheral nerve

 Low  
 
 
 

ADIPOSE TISSUE - HPA RNA-seq

Average TPM

17.7
N/A Female, age 80 Sample 1
TPM: 14.2
Cell types%
Adipocytes: 95
Other cell types: 5
N/A Female, age 45 Sample 2
TPM: 19.7
N/A Female, age 57 Sample 3
TPM: 18.4
Cell types%
Adipocytes: 60
Fibroblasts: 20
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 74 Sample 4
TPM: 13.6
Cell types%
Adipocytes: 50
Fibroblasts: 30
Smooth muscle cells: 15
Other cell types: 5
overview Female, age 59 Sample 5
TPM: 22.5
Cell types%
Adipocytes: 40
Fibroblasts: 40
Smooth muscle cells: 15
Other cell types: 5

ADIPOSE TISSUE - GTEx RNA-seq

Average RPKM

9.4

GTEx sample id

Sample description

RPKM
Adipose - Subcutaneous
RPKM: 10.6
Samples: 350

Max RPKM: 25.5
Min RPKM: 4.9
Std RPKM: 3.0
Median RPKM: 10.2
GTEX-OIZI-0226-SM-2XCEE 40-49 years, male 25.5
GTEX-P44H-0326-SM-2XCES 40-49 years, male 24.1
GTEX-REY6-0326-SM-2TF5A 60-69 years, male 20.9
GTEX-RVPU-2326-SM-2TF6R 50-59 years, male 20.0
GTEX-145ME-1926-SM-5SI9S 40-49 years, female 19.3
GTEX-TSE9-0226-SM-3DB84 60-69 years, female 19.3
GTEX-13S7M-0226-SM-5S2UG 60-69 years, female 17.8
GTEX-X5EB-2426-SM-4E3HX 40-49 years, male 17.5
GTEX-ZVT4-0226-SM-51MSD 50-59 years, female 17.4
GTEX-S32W-2226-SM-2XCAY 50-59 years, female 17.2
Show all
Adipose - Visceral (Omentum)
RPKM: 7.5
Samples: 227

Max RPKM: 14.0
Min RPKM: 2.5
Std RPKM: 1.6
Median RPKM: 7.4
GTEX-113JC-0726-SM-5GZZR 50-59 years, female 14.0
GTEX-13JUV-0626-SM-5J1MQ 40-49 years, female 12.7
GTEX-ZF29-0826-SM-5S2NP 60-69 years, female 12.4
GTEX-WYJK-1426-SM-3NM8V 50-59 years, male 12.0
GTEX-WFJO-1026-SM-3GIKL 30-39 years, male 11.7
GTEX-11WQK-1526-SM-5EGKN 50-59 years, male 11.5
GTEX-13OW8-0326-SM-5L3FB 60-69 years, male 11.3
GTEX-11P7K-0826-SM-5BC5F 30-39 years, male 10.8
GTEX-13NYS-0726-SM-5J1OR 60-69 years, male 10.8
GTEX-13PL7-1226-SM-5SIAR 60-69 years, female 10.6
Show all

ADIPOSE TISSUE - FANTOM5 CAGE

Average Tags Per Million

42.5

FANTOM5 sample id

Sample description

Tags Per Million
Adipose tissue
Tags Per Million: 42.5
FF:10010-101C1 65,65,76 years, mixed 42.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg foundation.